Building on phoebe.caelum.ci.dev
(from ocaml/opam:debian-unstable)
Unable to find image 'ocaml/opam:debian-unstable' locally
debian-unstable: Pulling from ocaml/opam
Digest: sha256:9d6ee237fc4a0f2d144b9f12cf3c55843e12649cd33c20ff24b4e8d1a10c60b0
Status: Downloaded newer image for ocaml/opam:debian-unstable
2026-05-15 09:41.28 ---> using "0acd5aeaa8f7bc314514d9795d14a7f12ec72a6a5b11c5904350189734c6859b" from cache
/: (user (uid 1000) (gid 1000))
/: (env OPAMPRECISETRACKING 1)
/: (env OPAMUTF8 never)
/: (env OPAMEXTERNALSOLVER builtin-0install)
/: (env OPAMCRITERIA +removed)
/: (env CI true)
/: (env OPAM_HEALTH_CHECK_CI true)
/: (run (shell "sudo ln -f /usr/bin/opam-dev /usr/bin/opam"))
2026-05-15 09:41.28 ---> using "40df4fa4cdfc68a5fa7a326047e82a7adc5df52b8059d4a7b745bdd50aad56e7" from cache
/: (run (network host)
(shell "rm -rf ~/opam-repository && git clone -q 'https://github.com/ocaml/opam-repository' ~/opam-repository && git -C ~/opam-repository checkout -q ba330746a50a77a950460e0b4891860ef8473d4a"))
2026-05-15 09:41.28 ---> using "0b49d9c5d33265e52b08d514139ec3a7efff263621554bb891ac88b3da01b46a" from cache
/: (run (shell "rm -rf ~/.opam && opam init -ya --bare --config ~/.opamrc-sandbox ~/opam-repository"))
Configuring from /home/opam/.opamrc-sandbox, then /home/opam/.opamrc, and finally from built-in defaults.
Checking for available remotes: rsync and local, git.
- you won't be able to use mercurial repositories unless you install the hg command on your system.
- you won't be able to use darcs repositories unless you install the darcs command on your system.
<><> Fetching repository information ><><><><><><><><><><><><><><><><><><><><><>
[default] Initialised
User configuration:
~/.profile is already up-to-date.
2026-05-15 09:41.28 ---> using "b7ecd9b0118fa7e153c05dc4df3871f8f2c9ddbf76d9663cd7e4dde34de6053e" from cache
/: (run (cache (opam-archives (target /home/opam/.opam/download-cache)) (opam-dune-cache (target /home/opam/.cache/dune)))
(network host)
(shell "opam switch create --repositories=default '5.3-opam' '5.3.0'"))
<><> Installing new switch packages <><><><><><><><><><><><><><><><><><><><><><>
Switch invariant: ["ocaml-base-compiler" {= "5.3.0"}]
<><> Processing actions <><><><><><><><><><><><><><><><><><><><><><><><><><><><>
-> installed base-bigarray.base
-> installed base-threads.base
-> installed base-unix.base
-> installed ocaml-options-vanilla.1
-> retrieved ocaml-config.3 (2 extra sources)
-> retrieved ocaml-config.3 (2 extra sources)
-> retrieved ocaml-compiler.5.3.0 (cached)
-> installed ocaml-compiler.5.3.0
-> installed ocaml-base-compiler.5.3.0
-> installed ocaml-config.3
-> installed ocaml.5.3.0
-> installed base-domains.base
-> installed base-effects.base
-> installed base-nnp.base
Done.
# To update the current shell environment, run: eval $(opam env --switch=5.3-opam)
2026-05-15 09:41.28 ---> using "41faa638303766ca262e7de852394b2e57f78dd2e5175e14d2ec6673576b5d95" from cache
/: (run (network host)
(shell "opam update --depexts"))
+ /usr/bin/sudo "apt-get" "update"
- Get:1 http://deb.debian.org/debian unstable InRelease [189 kB]
- Get:2 http://deb.debian.org/debian unstable/main amd64 Packages.diff/Index [63.6 kB]
- Get:3 http://deb.debian.org/debian unstable/main amd64 Packages T-2026-05-15-0801.38-F-2026-05-10-0200.31.pdiff [361 kB]
- Get:3 http://deb.debian.org/debian unstable/main amd64 Packages T-2026-05-15-0801.38-F-2026-05-10-0200.31.pdiff [361 kB]
- Fetched 614 kB in 2s (280 kB/s)
- Reading package lists...
2026-05-15 09:41.28 ---> using "83d06f9b290f8fa9acae9c92874804750322455980bdf3e52099776e128ec662" from cache
/: (run (cache (opam-archives (target /home/opam/.opam/download-cache)) (opam-dune-cache (target /home/opam/.cache/dune)))
(network host)
(shell "opam pin add -k version dune $(opam show -f version dune)"))
dune is now pinned to version 3.23.0
The following actions will be performed:
=== install 1 package
- install dune 3.23.0 (pinned)
<><> Processing actions <><><><><><><><><><><><><><><><><><><><><><><><><><><><>
-> retrieved dune.3.23.0 (cached)
-> installed dune.3.23.0
Done.
# To update the current shell environment, run: eval $(opam env)
2026-05-15 09:41.28 ---> using "7265f30b092a56c7885cec35a3cbb57018b52ead97eb8ee5c84033684bc61948" from cache
/: (env DUNE_CACHE enabled)
/: (env DUNE_CACHE_TRANSPORT direct)
/: (env DUNE_CACHE_DUPLICATION copy)
/: (run (cache (opam-archives (target /home/opam/.opam/download-cache)) (opam-dune-cache (target /home/opam/.cache/dune)))
(network host)
(shell "opam remove -y hts_shrink.3.0.1\
\nopam install -vy hts_shrink.3.0.1\
\nres=$?\
\nif [ $res = 31 ]; then\
\n if opam show -f x-ci-accept-failures: hts_shrink.3.0.1 | grep -q 'debian-unstable'; then\
\n echo \"This package failed and has been disabled for CI using the 'x-ci-accept-failures' field.\"\
\n exit 69\
\n fi\
\nfi \
\n\
\n\
\nexit $res"))
[NOTE] hts_shrink.3.0.1 is not installed.
Nothing to do.
The following actions will be performed:
=== install 31 packages
- install base-bytes base [required by dokeysto]
- install batteries 3.10.0 [required by hts_shrink]
- install bst 7.1.0 [required by hts_shrink]
- install camlp-streams 5.0.1 [required by batteries]
- install conf-autoconf 0.2 [required by cpu]
- install conf-graphviz 0.1 [required by molenc]
- install conf-python-3 9.0.0 [required by molenc]
- install conf-rdkit 1 [required by molenc]
- install cpm 12.2.0 [required by hts_shrink]
- install cpu 2.0.0 [required by parany]
- install csexp 1.5.2 [required by dune-configurator]
- install dokeysto 4.0.2 [required by molenc]
- install dolog 6.0.0 [required by hts_shrink]
- install dune-configurator 3.23.0 [required by extunix]
- install extunix 0.4.4 [required by dokeysto]
- install hts_shrink 3.0.1
- install line_oriented 1.3.0 [required by molenc]
- install minicli 5.0.2 [required by hts_shrink]
- install molenc 17.0.1 [required by hts_shrink]
- install num 1.6 [required by batteries]
- install ocaml-compiler-libs v0.17.0 [required by ppxlib]
- install ocamlfind 1.9.8 [required by batteries]
- install ocamlgraph 2.2.0 [required by molenc]
- install parany 14.0.1 [required by hts_shrink]
- install ppx_derivers 1.2.1 [required by ppxlib]
- install ppxlib 0.38.0 [required by extunix]
- install pyml 20250807 [required by molenc]
- install sexplib0 v0.17.0 [required by ppxlib]
- install stdcompat 21.1 [required by pyml]
- install stdlib-shims 0.3.0 [required by ppxlib]
- install vector3 1.0.0 [required by molenc]
The following system packages will first need to be installed:
autoconf graphviz librdkit-dev python3 python3-rdkit
<><> Handling external dependencies <><><><><><><><><><><><><><><><><><><><><><>
opam believes some required external dependencies are missing. opam can:
> 1. Run apt-get to install them (may need root/sudo access)
2. Display the recommended apt-get command and wait while you run it manually (e.g. in another terminal)
3. Continue anyway, and, upon success, permanently register that this external dependency is present, but not detectable
4. Abort the installation
[1/2/3/4] 1
+ /usr/bin/sudo "apt-get" "install" "-qq" "-yy" "autoconf" "graphviz" "librdkit-dev" "python3" "python3-rdkit"
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- Adding 'diversion of /lib/x86_64-linux-gnu/libreadline.so.8 to /lib/x86_64-linux-gnu/libreadline.so.8.usr-is-merged by libreadline8t64'
- Adding 'diversion of /lib/x86_64-linux-gnu/libreadline.so.8.2 to /lib/x86_64-linux-gnu/libreadline.so.8.2.usr-is-merged by libreadline8t64'
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- Preparing to unpack .../50-libxpm4_1%3a3.5.19-1_amd64.deb ...
- Unpacking libxpm4:amd64 (1:3.5.19-1) ...
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- Preparing to unpack .../51-libgd3_2.3.3-13+b2_amd64.deb ...
- Unpacking libgd3:amd64 (2.3.3-13+b2) ...
- Selecting previously unselected package libgvplugin-gd8:amd64.
- Preparing to unpack .../52-libgvplugin-gd8_14.1.2-1+b1_amd64.deb ...
- Unpacking libgvplugin-gd8:amd64 (14.1.2-1+b1) ...
- Selecting previously unselected package libglib2.0-0t64:amd64.
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- Unpacking libglib2.0-0t64:amd64 (2.88.1-2) ...
- Selecting previously unselected package libfribidi0:amd64.
- Preparing to unpack .../54-libfribidi0_1.0.16-5+b1_amd64.deb ...
- Unpacking libfribidi0:amd64 (1.0.16-5+b1) ...
- Selecting previously unselected package libgraphite2-3:amd64.
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- Unpacking libgraphite2-3:amd64 (1.3.14-13) ...
- Selecting previously unselected package libharfbuzz0b:amd64.
- Preparing to unpack .../56-libharfbuzz0b_12.3.2-2+b2_amd64.deb ...
- Unpacking libharfbuzz0b:amd64 (12.3.2-2+b2) ...
- Selecting previously unselected package libthai-data.
- Preparing to unpack .../57-libthai-data_0.1.30-1_all.deb ...
- Unpacking libthai-data (0.1.30-1) ...
- Selecting previously unselected package libdatrie1:amd64.
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- Unpacking libdatrie1:amd64 (0.2.14-1+b1) ...
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- Unpacking libthai0:amd64 (0.1.30-1+b1) ...
- Selecting previously unselected package libpango-1.0-0:amd64.
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- Unpacking libpangoft2-1.0-0:amd64 (1.57.1-2) ...
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- Selecting previously unselected package libgvplugin-pango8:amd64.
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- Unpacking libgvplugin-pango8:amd64 (14.1.2-1+b1) ...
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- Unpacking graphviz (14.1.2-1+b1) ...
- Selecting previously unselected package libboost-iostreams1.90.0:amd64.
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- Unpacking libboost-iostreams1.90.0:amd64 (1.90.0-6) ...
- Selecting previously unselected package libboost-python1.90.0.
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- Unpacking libboost-python1.90.0 (1.90.0-6) ...
- Selecting previously unselected package libboost-numpy1.90.0.
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- Unpacking libboost-serialization1.90.0:amd64 (1.90.0-6) ...
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- Unpacking libglib2.0-data (2.88.1-2) ...
- Selecting previously unselected package libheif-plugin-aomenc:amd64.
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- Selecting previously unselected package libnuma1:amd64.
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- Unpacking libinchi1.07 (1.07.3+dfsg-2) ...
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- Unpacking python3-olefile (0.47-1) ...
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- Unpacking python3-pil:amd64 (12.2.0-1) ...
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- Unpacking rdkit-data (202603.2-1) ...
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- Unpacking python3-rdkit (202603.2-1) ...
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- Unpacking xdg-user-dirs (0.20-1) ...
- Setting up media-types (14.0.0) ...
- Setting up libxdot4:amd64 (14.1.2-1+b1) ...
- Setting up libgraphite2-3:amd64 (1.3.14-13) ...
- Setting up liblcms2-2:amd64 (2.19.1-1) ...
- Setting up libcdt6:amd64 (14.1.2-1+b1) ...
- Setting up libpixman-1-0:amd64 (0.46.4-1+b2) ...
- Setting up libsharpyuv0:amd64 (1.5.0-0.1+b2) ...
- Setting up libaom3:amd64 (3.13.1-2+b1) ...
- Setting up liblerc4:amd64 (4.1.0+ds-1) ...
- Setting up libxpm4:amd64 (1:3.5.19-1) ...
- Setting up libxrender1:amd64 (1:0.9.12-1+b2) ...
- Setting up libdatrie1:amd64 (0.2.14-1+b1) ...
- Setting up xdg-user-dirs (0.20-1) ...
- Created symlink '/etc/systemd/user/graphical-session-pre.target.wants/xdg-user-dirs.service' → '/usr/lib/systemd/user/xdg-user-dirs.service'.
- Setting up libxcb-render0:amd64 (1.17.0-2+b2) ...
- Setting up libxml2-16:amd64 (2.15.2+dfsg-0.1) ...
- Setting up libdeflate0:amd64 (1.23-2+b2) ...
- Setting up fonts-freefont-ttf (20211204+svn4273-4) ...
- Setting up m4 (1.4.21-1) ...
- Setting up libxcb-shm0:amd64 (1.17.0-2+b2) ...
- Setting up rdkit-data (202603.2-1) ...
- Setting up libjbig0:amd64 (2.1-6.1+b3) ...
- Setting up librav1e0.8:amd64 (0.8.1-10) ...
- Setting up libboost-python1.90.0 (1.90.0-6) ...
- Setting up autotools-dev (20240727.1+nmu1) ...
- Setting up libglib2.0-0t64:amd64 (2.88.1-2) ...
- No schema files found: doing nothing.
- Setting up libblas3:amd64 (3.12.1-7+b2) ...
- update-alternatives: using /usr/lib/x86_64-linux-gnu/blas/libblas.so.3 to provide /usr/lib/x86_64-linux-gnu/libblas.so.3 (libblas.so.3-x86_64-linux-gnu) in auto mode
- Setting up libglib2.0-data (2.88.1-2) ...
- Setting up libjpeg62-turbo:amd64 (1:3.1.3-4) ...
- Setting up libpathplan4:amd64 (14.1.2-1+b1) ...
- Setting up libfribidi0:amd64 (1.0.16-5+b1) ...
- Setting up shared-mime-info (2.4-5+b3) ...
- Setting up libimagequant0:amd64 (4.4.1-1+b2) ...
- Setting up libpng16-16t64:amd64 (1.6.58-1) ...
- Setting up python3-numpy-dev:amd64 (1:2.4.4+ds-2) ...
- Setting up libltdl7:amd64 (2.5.4-11) ...
- Setting up libsvtav1enc4:amd64 (4.1.0+dfsg-1) ...
- Setting up libgfortran5:amd64 (16.1.0-1) ...
- Setting up autoconf (2.73-2) ...
- Setting up libcgraph8:amd64 (14.1.2-1+b1) ...
- Setting up libwebp7:amd64 (1.5.0-0.1+b2) ...
- Setting up libnuma1:amd64 (2.0.19-1+b2) ...
- Setting up libgvpr2:amd64 (14.1.2-1+b1) ...
- Setting up libdav1d7:amd64 (1.5.3-1+b2) ...
- Setting up libtiff6:amd64 (4.7.1-2) ...
- Setting up fonts-liberation (1:2.1.5-3) ...
- Setting up libopenjp2-7:amd64 (2.5.4-1.1) ...
- Setting up libthai-data (0.1.30-1) ...
- Setting up libabsl20260107:amd64 (20260107.0-5) ...
- Setting up libboost-serialization1.90.0:amd64 (1.90.0-6) ...
- Setting up libcoordgen3:amd64 (3.0.2-4) ...
- Setting up fonts-liberation-sans-narrow (1:1.07.6-4) ...
- Setting up libde265-0:amd64 (1.0.18-1) ...
- Setting up libx265-215:amd64 (4.1-4+b2) ...
- Setting up libwebpmux3:amd64 (1.5.0-0.1+b2) ...
- Setting up libinchi1.07 (1.07.3+dfsg-2) ...
- Setting up libyuv0:amd64 (0.0.1922.20260106-1+b1) ...
- Setting up readline-common (8.3-4) ...
- Setting up libboost-iostreams1.90.0:amd64 (1.90.0-6) ...
- Setting up automake (1:1.18.1-4) ...
- update-alternatives: using /usr/bin/automake-1.18 to provide /usr/bin/automake (automake) in auto mode
- Setting up liblapack3:amd64 (3.12.1-7+b2) ...
- update-alternatives: using /usr/lib/x86_64-linux-gnu/lapack/liblapack.so.3 to provide /usr/lib/x86_64-linux-gnu/liblapack.so.3 (liblapack.so.3-x86_64-linux-gnu) in auto mode
- Setting up libboost-numpy1.90.0 (1.90.0-6) ...
- Setting up fontconfig-config (2.17.1-5) ...
- Setting up libwebpdemux2:amd64 (1.5.0-0.1+b2) ...
- Setting up libmaeparser1:amd64 (1.3.3-4+b1) ...
- Setting up libthai0:amd64 (0.1.30-1+b1) ...
- Setting up libfreetype6:amd64 (2.14.3+dfsg-1) ...
- Setting up libgvc7:amd64 (14.1.2-1+b1) ...
- Setting up libreadline8t64:amd64 (8.3-4) ...
- Setting up libgav1-2:amd64 (0.20.0-2+b1) ...
- Setting up libharfbuzz0b:amd64 (12.3.2-2+b2) ...
- Setting up libfontconfig1:amd64 (2.17.1-5) ...
- Setting up libpython3.13-stdlib:amd64 (3.13.12-1) ...
- Setting up libpython3-stdlib:amd64 (3.13.9-3+b1) ...
- Setting up fontconfig (2.17.1-5) ...
- Regenerating fonts cache...
- done.
- Setting up libavif16:amd64 (1.4.1-1+b1) ...
- Setting up python3.13 (3.13.12-1) ...
- Setting up libpango-1.0-0:amd64 (1.57.1-2) ...
- Setting up python3 (3.13.9-3+b1) ...
- running python rtupdate hooks for python3.13...
- running python post-rtupdate hooks for python3.13...
- Setting up libcairo2:amd64 (1.18.4-3+b1) ...
- Setting up libraqm0:amd64 (0.10.5-1) ...
- Setting up python3-numpy (1:2.4.4+ds-2) ...
- Setting up libpangoft2-1.0-0:amd64 (1.57.1-2) ...
- Setting up libpangocairo-1.0-0:amd64 (1.57.1-2) ...
- Setting up librdkit1t64 (202603.2-1) ...
- Setting up python3-olefile (0.47-1) ...
- Setting up libgvplugin-pango8:amd64 (14.1.2-1+b1) ...
- Setting up python3-pil:amd64 (12.2.0-1) ...
- Setting up python3-rdkit (202603.2-1) ...
- Setting up librdkit-dev (202603.2-1) ...
- Setting up libheif-plugin-libde265:amd64 (1.21.2-4) ...
- Setting up libheif-plugin-dav1d:amd64 (1.21.2-4) ...
- Setting up libheif1:amd64 (1.21.2-4) ...
- Setting up libgd3:amd64 (2.3.3-13+b2) ...
- Setting up libheif-plugin-x265:amd64 (1.21.2-4) ...
- Setting up libheif-plugin-aomenc:amd64 (1.21.2-4) ...
- Setting up libgvplugin-gd8:amd64 (14.1.2-1+b1) ...
- Setting up graphviz (14.1.2-1+b1) ...
- Processing triggers for libc-bin (2.42-16) ...
- Processing triggers for systemd (260.1-1) ...
<><> Processing actions <><><><><><><><><><><><><><><><><><><><><><><><><><><><>
Processing 2/93: [batteries.3.10.0: extract]
Processing 3/93: [batteries.3.10.0: extract] [bst.7.1.0: extract]
Processing 4/93: [batteries.3.10.0: extract] [bst.7.1.0: extract] [camlp-streams.5.0.1: extract]
-> retrieved batteries.3.10.0 (cached)
Processing 4/93: [bst.7.1.0: extract] [camlp-streams.5.0.1: extract]
Processing 5/93: [bst.7.1.0: extract] [camlp-streams.5.0.1: extract]
Processing 6/93: [bst.7.1.0: extract] [camlp-streams.5.0.1: extract]
-> retrieved conf-python-3.9.0.0 (cached)
Processing 7/93: [bst.7.1.0: extract] [camlp-streams.5.0.1: extract]
-> retrieved conf-rdkit.1 (cached)
Processing 8/93: [bst.7.1.0: extract] [camlp-streams.5.0.1: extract]
Processing 9/93: [bst.7.1.0: extract] [camlp-streams.5.0.1: extract] [cpm.12.2.0: extract]
Processing 10/93: [bst.7.1.0: extract] [camlp-streams.5.0.1: extract] [cpm.12.2.0: extract] [conf-autoconf: autoconf]
Processing 11/93: [bst.7.1.0: extract] [camlp-streams.5.0.1: extract] [cpm.12.2.0: extract] [conf-autoconf: autoconf] [conf-graphviz: dot]
Processing 12/93: [bst.7.1.0: extract] [camlp-streams.5.0.1: extract] [cpm.12.2.0: extract] [conf-autoconf: autoconf] [conf-graphviz: dot] [conf-python-3: python3 test.py]
Processing 13/93: [bst.7.1.0: extract] [camlp-streams.5.0.1: extract] [cpm.12.2.0: extract] [conf-autoconf: autoconf] [conf-graphviz: dot] [conf-python-3: python3 test.py] [conf-rdkit: sh]
-> retrieved bst.7.1.0 (cached)
Processing 13/93: [camlp-streams.5.0.1: extract] [cpm.12.2.0: extract] [conf-autoconf: autoconf] [conf-graphviz: dot] [conf-python-3: python3 test.py] [conf-rdkit: sh]
Processing 14/93: [camlp-streams.5.0.1: extract] [cpm.12.2.0: extract] [cpu.2.0.0: extract] [conf-autoconf: autoconf] [conf-graphviz: dot] [conf-python-3: python3 test.py] [conf-rdkit: sh]
-> retrieved camlp-streams.5.0.1 (cached)
Processing 14/93: [cpm.12.2.0: extract] [cpu.2.0.0: extract] [conf-autoconf: autoconf] [conf-graphviz: dot] [conf-python-3: python3 test.py] [conf-rdkit: sh]
Processing 15/93: [cpm.12.2.0: extract] [cpu.2.0.0: extract] [csexp.1.5.2: extract] [conf-autoconf: autoconf] [conf-graphviz: dot] [conf-python-3: python3 test.py] [conf-rdkit: sh]
Processing 16/93: [cpm.12.2.0: extract] [cpu.2.0.0: extract] [csexp.1.5.2: extract] [camlp-streams: dune build] [conf-autoconf: autoconf] [conf-graphviz: dot] [conf-python-3: python3 test.py] [conf-rdkit: sh]
-> retrieved cpm.12.2.0 (cached)
Processing 16/93: [cpu.2.0.0: extract] [csexp.1.5.2: extract] [camlp-streams: dune build] [conf-autoconf: autoconf] [conf-graphviz: dot] [conf-python-3: python3 test.py] [conf-rdkit: sh]
Processing 17/93: [cpu.2.0.0: extract] [csexp.1.5.2: extract] [dokeysto.4.0.2: extract] [camlp-streams: dune build] [conf-autoconf: autoconf] [conf-graphviz: dot] [conf-python-3: python3 test.py] [conf-rdkit: sh]
-> retrieved cpu.2.0.0 (cached)
Processing 17/93: [csexp.1.5.2: extract] [dokeysto.4.0.2: extract] [camlp-streams: dune build] [conf-autoconf: autoconf] [conf-graphviz: dot] [conf-python-3: python3 test.py] [conf-rdkit: sh]
Processing 18/93: [csexp.1.5.2: extract] [dokeysto.4.0.2: extract] [dolog.6.0.0: extract] [camlp-streams: dune build] [conf-autoconf: autoconf] [conf-graphviz: dot] [conf-python-3: python3 test.py] [conf-rdkit: sh]
-> retrieved csexp.1.5.2 (cached)
Processing 18/93: [dokeysto.4.0.2: extract] [dolog.6.0.0: extract] [camlp-streams: dune build] [conf-autoconf: autoconf] [conf-graphviz: dot] [conf-python-3: python3 test.py] [conf-rdkit: sh]
Processing 19/93: [dokeysto.4.0.2: extract] [dolog.6.0.0: extract] [dune-configurator.3.23.0: extract] [camlp-streams: dune build] [conf-autoconf: autoconf] [conf-graphviz: dot] [conf-python-3: python3 test.py] [conf-rdkit: sh]
Processing 20/93: [dokeysto.4.0.2: extract] [dolog.6.0.0: extract] [dune-configurator.3.23.0: extract] [camlp-streams: dune build] [conf-autoconf: autoconf] [conf-graphviz: dot] [conf-python-3: python3 test.py] [conf-rdkit: sh] [csexp: dune build]
+ /home/opam/.opam/opam-init/hooks/sandbox.sh "build" "dot" "-V" (CWD=/home/opam/.opam/5.3-opam/.opam-switch/build/conf-graphviz.0.1)
- dot - graphviz version 14.1.2 (0)
-> compiled conf-graphviz.0.1
Processing 20/93: [dokeysto.4.0.2: extract] [dolog.6.0.0: extract] [dune-configurator.3.23.0: extract] [camlp-streams: dune build] [conf-autoconf: autoconf] [conf-python-3: python3 test.py] [conf-rdkit: sh] [csexp: dune build]
-> installed conf-graphviz.0.1
Processing 21/93: [dokeysto.4.0.2: extract] [dolog.6.0.0: extract] [dune-configurator.3.23.0: extract] [camlp-streams: dune build] [conf-autoconf: autoconf] [conf-python-3: python3 test.py] [conf-rdkit: sh] [csexp: dune build]
+ /home/opam/.opam/opam-init/hooks/sandbox.sh "build" "python3" "test.py" (CWD=/home/opam/.opam/5.3-opam/.opam-switch/build/conf-python-3.9.0.0)
- python-3 OK
-> compiled conf-python-3.9.0.0
Processing 21/93: [dokeysto.4.0.2: extract] [dolog.6.0.0: extract] [dune-configurator.3.23.0: extract] [camlp-streams: dune build] [conf-autoconf: autoconf] [conf-rdkit: sh] [csexp: dune build]
-> installed conf-python-3.9.0.0
Processing 22/93: [dokeysto.4.0.2: extract] [dolog.6.0.0: extract] [dune-configurator.3.23.0: extract] [camlp-streams: dune build] [conf-autoconf: autoconf] [conf-rdkit: sh] [csexp: dune build]
-> retrieved dokeysto.4.0.2 (cached)
Processing 22/93: [dolog.6.0.0: extract] [dune-configurator.3.23.0: extract] [camlp-streams: dune build] [conf-autoconf: autoconf] [conf-rdkit: sh] [csexp: dune build]
Processing 23/93: [dolog.6.0.0: extract] [dune-configurator.3.23.0: extract] [extunix.0.4.4: extract] [camlp-streams: dune build] [conf-autoconf: autoconf] [conf-rdkit: sh] [csexp: dune build]
-> retrieved dolog.6.0.0 (cached)
Processing 23/93: [dune-configurator.3.23.0: extract] [extunix.0.4.4: extract] [camlp-streams: dune build] [conf-autoconf: autoconf] [conf-rdkit: sh] [csexp: dune build]
Processing 24/93: [dune-configurator.3.23.0: extract] [extunix.0.4.4: extract] [hts_shrink.3.0.1: extract] [camlp-streams: dune build] [conf-autoconf: autoconf] [conf-rdkit: sh] [csexp: dune build]
Processing 25/93: [dune-configurator.3.23.0: extract] [extunix.0.4.4: extract] [hts_shrink.3.0.1: extract] [camlp-streams: dune build] [conf-autoconf: autoconf] [conf-rdkit: sh] [csexp: dune build] [dolog: dune build]
+ /home/opam/.opam/opam-init/hooks/sandbox.sh "build" "autoconf" "-V" (CWD=/home/opam/.opam/5.3-opam/.opam-switch/build/conf-autoconf.0.2)
- autoconf (GNU Autoconf) 2.73
- Copyright (C) 2026 Free Software Foundation, Inc.
- License GPLv3+/Autoconf: GNU GPL version 3 or later
- <https://gnu.org/licenses/gpl.html>, <https://gnu.org/licenses/exceptions.html>
- This is free software: you are free to change and redistribute it.
- There is NO WARRANTY, to the extent permitted by law.
-
- Written by David J. MacKenzie and Akim Demaille.
-> compiled conf-autoconf.0.2
Processing 25/93: [dune-configurator.3.23.0: extract] [extunix.0.4.4: extract] [hts_shrink.3.0.1: extract] [camlp-streams: dune build] [conf-rdkit: sh] [csexp: dune build] [dolog: dune build]
-> installed conf-autoconf.0.2
Processing 26/93: [dune-configurator.3.23.0: extract] [extunix.0.4.4: extract] [hts_shrink.3.0.1: extract] [camlp-streams: dune build] [conf-rdkit: sh] [csexp: dune build] [dolog: dune build]
Processing 27/93: [dune-configurator.3.23.0: extract] [extunix.0.4.4: extract] [hts_shrink.3.0.1: extract] [camlp-streams: dune build] [conf-rdkit: sh] [cpu: autoconf] [csexp: dune build] [dolog: dune build]
-> retrieved extunix.0.4.4 (cached)
Processing 27/93: [dune-configurator.3.23.0: extract] [hts_shrink.3.0.1: extract] [camlp-streams: dune build] [conf-rdkit: sh] [cpu: autoconf] [csexp: dune build] [dolog: dune build]
Processing 28/93: [dune-configurator.3.23.0: extract] [hts_shrink.3.0.1: extract] [line_oriented.1.3.0: extract] [camlp-streams: dune build] [conf-rdkit: sh] [cpu: autoconf] [csexp: dune build] [dolog: dune build]
-> retrieved line_oriented.1.3.0 (cached)
Processing 28/93: [dune-configurator.3.23.0: extract] [hts_shrink.3.0.1: extract] [camlp-streams: dune build] [conf-rdkit: sh] [cpu: autoconf] [csexp: dune build] [dolog: dune build]
Processing 29/93: [dune-configurator.3.23.0: extract] [hts_shrink.3.0.1: extract] [minicli.5.0.2: extract] [camlp-streams: dune build] [conf-rdkit: sh] [cpu: autoconf] [csexp: dune build] [dolog: dune build]
-> retrieved hts_shrink.3.0.1 (cached)
Processing 29/93: [dune-configurator.3.23.0: extract] [minicli.5.0.2: extract] [camlp-streams: dune build] [conf-rdkit: sh] [cpu: autoconf] [csexp: dune build] [dolog: dune build]
Processing 30/93: [dune-configurator.3.23.0: extract] [minicli.5.0.2: extract] [molenc.17.0.1: http] [camlp-streams: dune build] [conf-rdkit: sh] [cpu: autoconf] [csexp: dune build] [dolog: dune build]
-> retrieved minicli.5.0.2 (cached)
Processing 30/93: [dune-configurator.3.23.0: extract] [molenc.17.0.1: http] [camlp-streams: dune build] [conf-rdkit: sh] [cpu: autoconf] [csexp: dune build] [dolog: dune build]
Processing 31/93: [dune-configurator.3.23.0: extract] [molenc.17.0.1: http] [num.1.6: extract] [camlp-streams: dune build] [conf-rdkit: sh] [cpu: autoconf] [csexp: dune build] [dolog: dune build]
Processing 32/93: [dune-configurator.3.23.0: extract] [molenc.17.0.1: http] [num.1.6: extract] [camlp-streams: dune build] [conf-rdkit: sh] [cpu: autoconf] [csexp: dune build] [dolog: dune build] [minicli: dune build]
-> retrieved num.1.6 (cached)
Processing 32/93: [dune-configurator.3.23.0: extract] [molenc.17.0.1: http] [camlp-streams: dune build] [conf-rdkit: sh] [cpu: autoconf] [csexp: dune build] [dolog: dune build] [minicli: dune build]
Processing 33/93: [dune-configurator.3.23.0: extract] [molenc.17.0.1: http] [ocaml-compiler-libs.v0.17.0: extract] [camlp-streams: dune build] [conf-rdkit: sh] [cpu: autoconf] [csexp: dune build] [dolog: dune build] [minicli: dune build]
Processing 34/93: [dune-configurator.3.23.0: extract] [molenc.17.0.1: http] [ocaml-compiler-libs.v0.17.0: extract] [camlp-streams: dune build] [conf-rdkit: sh] [cpu: autoconf] [csexp: dune build] [dolog: dune build] [minicli: dune build] [num: make opam-modern]
-> retrieved ocaml-compiler-libs.v0.17.0 (cached)
Processing 34/93: [dune-configurator.3.23.0: extract] [molenc.17.0.1: http] [camlp-streams: dune build] [conf-rdkit: sh] [cpu: autoconf] [csexp: dune build] [dolog: dune build] [minicli: dune build] [num: make opam-modern]
Processing 35/93: [dune-configurator.3.23.0: extract] [molenc.17.0.1: http] [ocamlfind.1.9.8: extract] [camlp-streams: dune build] [conf-rdkit: sh] [cpu: autoconf] [csexp: dune build] [dolog: dune build] [minicli: dune build] [num: make opam-modern]
Processing 36/93: [dune-configurator.3.23.0: extract] [molenc.17.0.1: http] [ocamlfind.1.9.8: extract] [camlp-streams: dune build] [conf-rdkit: sh] [cpu: autoconf] [csexp: dune build] [dolog: dune build] [minicli: dune build] [num: make opam-modern] [ocaml-compiler-libs: dune build]
+ /home/opam/.opam/opam-init/hooks/sandbox.sh "build" "sh" "-c" "c++ test.cpp -o test -I/usr/include/rdkit -lRDKitRDGeneral -DSWIG || c++ test.cpp -o test -I/usr/include/rdkit -lRDGeneral -DSWIG" (CWD=/home/opam/.opam/5.3-opam/.opam-switch/build/conf-rdkit.1)
Processing 36/93: [dune-configurator.3.23.0: extract] [molenc.17.0.1: http] [ocamlfind.1.9.8: extract] [camlp-streams: dune build] [conf-rdkit: ./test] [cpu: autoconf] [csexp: dune build] [dolog: dune build] [minicli: dune build] [num: make opam-modern] [ocaml-compiler-libs: dune build]
-> retrieved ocamlfind.1.9.8 (cached)
Processing 36/93: [dune-configurator.3.23.0: extract] [molenc.17.0.1: http] [camlp-streams: dune build] [conf-rdkit: ./test] [cpu: autoconf] [csexp: dune build] [dolog: dune build] [minicli: dune build] [num: make opam-modern] [ocaml-compiler-libs: dune build]
Processing 37/93: [dune-configurator.3.23.0: extract] [molenc.17.0.1: http] [ocamlgraph.2.2.0: extract] [camlp-streams: dune build] [conf-rdkit: ./test] [cpu: autoconf] [csexp: dune build] [dolog: dune build] [minicli: dune build] [num: make opam-modern] [ocaml-compiler-libs: dune build]
Processing 38/93: [dune-configurator.3.23.0: extract] [molenc.17.0.1: http] [ocamlgraph.2.2.0: extract] [camlp-streams: dune build] [conf-rdkit: ./test] [cpu: autoconf] [csexp: dune build] [dolog: dune build] [minicli: dune build] [num: make opam-modern] [ocaml-compiler-libs: dune build] [ocamlfind: ./configure]
+ /home/opam/.opam/opam-init/hooks/sandbox.sh "build" "./test" (CWD=/home/opam/.opam/5.3-opam/.opam-switch/build/conf-rdkit.1)
- 2026.03.2
-> compiled conf-rdkit.1
Processing 38/93: [dune-configurator.3.23.0: extract] [molenc.17.0.1: http] [ocamlgraph.2.2.0: extract] [camlp-streams: dune build] [cpu: autoconf] [csexp: dune build] [dolog: dune build] [minicli: dune build] [num: make opam-modern] [ocaml-compiler-libs: dune build] [ocamlfind: ./configure]
-> installed conf-rdkit.1
Processing 39/93: [dune-configurator.3.23.0: extract] [molenc.17.0.1: http] [ocamlgraph.2.2.0: extract] [camlp-streams: dune build] [cpu: autoconf] [csexp: dune build] [dolog: dune build] [minicli: dune build] [num: make opam-modern] [ocaml-compiler-libs: dune build] [ocamlfind: ./configure]
-> retrieved ocamlgraph.2.2.0 (cached)
Processing 39/93: [dune-configurator.3.23.0: extract] [molenc.17.0.1: http] [camlp-streams: dune build] [cpu: autoconf] [csexp: dune build] [dolog: dune build] [minicli: dune build] [num: make opam-modern] [ocaml-compiler-libs: dune build] [ocamlfind: ./configure]
Processing 40/93: [dune-configurator.3.23.0: extract] [molenc.17.0.1: http] [parany.14.0.1: extract] [camlp-streams: dune build] [cpu: autoconf] [csexp: dune build] [dolog: dune build] [minicli: dune build] [num: make opam-modern] [ocaml-compiler-libs: dune build] [ocamlfind: ./configure]
Processing 41/93: [dune-configurator.3.23.0: extract] [molenc.17.0.1: http] [parany.14.0.1: extract] [camlp-streams: dune build] [cpu: autoconf] [csexp: dune build] [dolog: dune build] [minicli: dune build] [num: make opam-modern] [ocaml-compiler-libs: dune build] [ocamlfind: ./configure] [ocamlgraph: dune build]
+ /home/opam/.opam/opam-init/hooks/sandbox.sh "build" "dune" "build" "-p" "csexp" "-j" "71" "@install" (CWD=/home/opam/.opam/5.3-opam/.opam-switch/build/csexp.1.5.2)
- (cd _build/default && /home/opam/.opam/5.3-opam/bin/ocamlc.opt -w -40 -g -bin-annot -bin-annot-occurrences -I src/.csexp.objs/byte -cmi-file src/.csexp.objs/byte/csexp.cmi -no-alias-deps -o src/.csexp.objs/byte/csexp.cmo -c -impl src/csexp.ml)
- File "src/csexp.ml", line 236, characters 7-14:
- 236 | [@@inlined always]
- ^^^^^^^
- Warning 53 [misplaced-attribute]: the "inlined" attribute cannot appear in this context
- (cd _build/default && /home/opam/.opam/5.3-opam/bin/ocamlopt.opt -w -40 -g -I src/.csexp.objs/byte -I src/.csexp.objs/native -cmi-file src/.csexp.objs/byte/csexp.cmi -no-alias-deps -o src/.csexp.objs/native/csexp.cmx -c -impl src/csexp.ml)
- File "src/csexp.ml", line 236, characters 7-14:
- 236 | [@@inlined always]
- ^^^^^^^
- Warning 53 [misplaced-attribute]: the "inlined" attribute cannot appear in this context
-> compiled csexp.1.5.2
Processing 41/93: [dune-configurator.3.23.0: extract] [molenc.17.0.1: http] [parany.14.0.1: extract] [camlp-streams: dune build] [cpu: autoconf] [dolog: dune build] [minicli: dune build] [num: make opam-modern] [ocaml-compiler-libs: dune build] [ocamlfind: ./configure] [ocamlgraph: dune build]
-> installed csexp.1.5.2
Processing 42/93: [dune-configurator.3.23.0: extract] [molenc.17.0.1: http] [parany.14.0.1: extract] [camlp-streams: dune build] [cpu: autoconf] [dolog: dune build] [minicli: dune build] [num: make opam-modern] [ocaml-compiler-libs: dune build] [ocamlfind: ./configure] [ocamlgraph: dune build]
-> retrieved parany.14.0.1 (cached)
Processing 42/93: [dune-configurator.3.23.0: extract] [molenc.17.0.1: http] [camlp-streams: dune build] [cpu: autoconf] [dolog: dune build] [minicli: dune build] [num: make opam-modern] [ocaml-compiler-libs: dune build] [ocamlfind: ./configure] [ocamlgraph: dune build]
Processing 43/93: [dune-configurator.3.23.0: extract] [molenc.17.0.1: http] [ppx_derivers.1.2.1: extract] [camlp-streams: dune build] [cpu: autoconf] [dolog: dune build] [minicli: dune build] [num: make opam-modern] [ocaml-compiler-libs: dune build] [ocamlfind: ./configure] [ocamlgraph: dune build]
-> retrieved ppx_derivers.1.2.1 (cached)
Processing 43/93: [dune-configurator.3.23.0: extract] [molenc.17.0.1: http] [camlp-streams: dune build] [cpu: autoconf] [dolog: dune build] [minicli: dune build] [num: make opam-modern] [ocaml-compiler-libs: dune build] [ocamlfind: ./configure] [ocamlgraph: dune build]
Processing 44/93: [dune-configurator.3.23.0: extract] [molenc.17.0.1: http] [ppxlib.0.38.0: extract] [camlp-streams: dune build] [cpu: autoconf] [dolog: dune build] [minicli: dune build] [num: make opam-modern] [ocaml-compiler-libs: dune build] [ocamlfind: ./configure] [ocamlgraph: dune build]
Processing 45/93: [dune-configurator.3.23.0: extract] [molenc.17.0.1: http] [ppxlib.0.38.0: extract] [camlp-streams: dune build] [cpu: autoconf] [dolog: dune build] [minicli: dune build] [num: make opam-modern] [ocaml-compiler-libs: dune build] [ocamlfind: ./configure] [ocamlgraph: dune build] [ppx_derivers: dune build]
+ /home/opam/.opam/opam-init/hooks/sandbox.sh "build" "dune" "build" "-p" "dolog" "-j" "71" (CWD=/home/opam/.opam/5.3-opam/.opam-switch/build/dolog.6.0.0)
-> compiled dolog.6.0.0
Processing 45/93: [dune-configurator.3.23.0: extract] [molenc.17.0.1: http] [ppxlib.0.38.0: extract] [camlp-streams: dune build] [cpu: autoconf] [minicli: dune build] [num: make opam-modern] [ocaml-compiler-libs: dune build] [ocamlfind: ./configure] [ocamlgraph: dune build] [ppx_derivers: dune build]
-> installed dolog.6.0.0
Processing 46/93: [dune-configurator.3.23.0: extract] [molenc.17.0.1: http] [ppxlib.0.38.0: extract] [camlp-streams: dune build] [cpu: autoconf] [minicli: dune build] [num: make opam-modern] [ocaml-compiler-libs: dune build] [ocamlfind: ./configure] [ocamlgraph: dune build] [ppx_derivers: dune build]
+ /home/opam/.opam/opam-init/hooks/sandbox.sh "build" "autoconf" (CWD=/home/opam/.opam/5.3-opam/.opam-switch/build/cpu.2.0.0)
- configure.ac:8: warning: The macro 'AC_HEADER_STDC' is obsolete.
- configure.ac:8: You should run autoupdate.
- ./lib/autoconf/headers.m4:664: AC_HEADER_STDC is expanded from...
- configure.ac:8: the top level
Processing 46/93: [dune-configurator.3.23.0: extract] [molenc.17.0.1: http] [ppxlib.0.38.0: extract] [camlp-streams: dune build] [cpu: autoheader] [minicli: dune build] [num: make opam-modern] [ocaml-compiler-libs: dune build] [ocamlfind: ./configure] [ocamlgraph: dune build] [ppx_derivers: dune build]
+ /home/opam/.opam/opam-init/hooks/sandbox.sh "build" "dune" "build" "-p" "minicli" "-j" "71" (CWD=/home/opam/.opam/5.3-opam/.opam-switch/build/minicli.5.0.2)
-> compiled minicli.5.0.2
Processing 46/93: [dune-configurator.3.23.0: extract] [molenc.17.0.1: http] [ppxlib.0.38.0: extract] [camlp-streams: dune build] [cpu: autoheader] [num: make opam-modern] [ocaml-compiler-libs: dune build] [ocamlfind: ./configure] [ocamlgraph: dune build] [ppx_derivers: dune build]
-> installed minicli.5.0.2
Processing 47/93: [dune-configurator.3.23.0: extract] [molenc.17.0.1: http] [ppxlib.0.38.0: extract] [camlp-streams: dune build] [cpu: autoheader] [num: make opam-modern] [ocaml-compiler-libs: dune build] [ocamlfind: ./configure] [ocamlgraph: dune build] [ppx_derivers: dune build]
-> retrieved ppxlib.0.38.0 (cached)
Processing 47/93: [dune-configurator.3.23.0: extract] [molenc.17.0.1: http] [camlp-streams: dune build] [cpu: autoheader] [num: make opam-modern] [ocaml-compiler-libs: dune build] [ocamlfind: ./configure] [ocamlgraph: dune build] [ppx_derivers: dune build]
Processing 48/93: [dune-configurator.3.23.0: extract] [molenc.17.0.1: http] [pyml.20250807: http] [camlp-streams: dune build] [cpu: autoheader] [num: make opam-modern] [ocaml-compiler-libs: dune build] [ocamlfind: ./configure] [ocamlgraph: dune build] [ppx_derivers: dune build]
+ /home/opam/.opam/opam-init/hooks/sandbox.sh "build" "dune" "build" "-p" "camlp-streams" "-j" "71" "@install" (CWD=/home/opam/.opam/5.3-opam/.opam-switch/build/camlp-streams.5.0.1)
-> compiled camlp-streams.5.0.1
Processing 48/93: [dune-configurator.3.23.0: extract] [molenc.17.0.1: http] [pyml.20250807: http] [cpu: autoheader] [num: make opam-modern] [ocaml-compiler-libs: dune build] [ocamlfind: ./configure] [ocamlgraph: dune build] [ppx_derivers: dune build]
-> installed camlp-streams.5.0.1
Processing 49/93: [dune-configurator.3.23.0: extract] [molenc.17.0.1: http] [pyml.20250807: http] [cpu: autoheader] [num: make opam-modern] [ocaml-compiler-libs: dune build] [ocamlfind: ./configure] [ocamlgraph: dune build] [ppx_derivers: dune build]
+ /home/opam/.opam/opam-init/hooks/sandbox.sh "build" "dune" "build" "-p" "ppx_derivers" "-j" "71" (CWD=/home/opam/.opam/5.3-opam/.opam-switch/build/ppx_derivers.1.2.1)
-> compiled ppx_derivers.1.2.1
Processing 49/93: [dune-configurator.3.23.0: extract] [molenc.17.0.1: http] [pyml.20250807: http] [cpu: autoheader] [num: make opam-modern] [ocaml-compiler-libs: dune build] [ocamlfind: ./configure] [ocamlgraph: dune build]
-> installed ppx_derivers.1.2.1
Processing 50/93: [dune-configurator.3.23.0: extract] [molenc.17.0.1: http] [pyml.20250807: http] [cpu: autoheader] [num: make opam-modern] [ocaml-compiler-libs: dune build] [ocamlfind: ./configure] [ocamlgraph: dune build]
Processing 50/93: [dune-configurator.3.23.0: extract] [molenc.17.0.1: extract] [pyml.20250807: http] [cpu: autoheader] [num: make opam-modern] [ocaml-compiler-libs: dune build] [ocamlfind: ./configure] [ocamlgraph: dune build]
-> retrieved molenc.17.0.1 (https://github.com/UnixJunkie/molenc/archive/refs/tags/v17.0.1.tar.gz)
Processing 50/93: [dune-configurator.3.23.0: extract] [pyml.20250807: http] [cpu: autoheader] [num: make opam-modern] [ocaml-compiler-libs: dune build] [ocamlfind: ./configure] [ocamlgraph: dune build]
Processing 51/93: [dune-configurator.3.23.0: extract] [pyml.20250807: http] [sexplib0.v0.17.0: extract] [cpu: autoheader] [num: make opam-modern] [ocaml-compiler-libs: dune build] [ocamlfind: ./configure] [ocamlgraph: dune build]
+ /home/opam/.opam/opam-init/hooks/sandbox.sh "build" "autoheader" (CWD=/home/opam/.opam/5.3-opam/.opam-switch/build/cpu.2.0.0)
Processing 51/93: [dune-configurator.3.23.0: extract] [pyml.20250807: http] [sexplib0.v0.17.0: extract] [cpu: ./configure] [num: make opam-modern] [ocaml-compiler-libs: dune build] [ocamlfind: ./configure] [ocamlgraph: dune build]
-> retrieved sexplib0.v0.17.0 (cached)
Processing 51/93: [dune-configurator.3.23.0: extract] [pyml.20250807: http] [cpu: ./configure] [num: make opam-modern] [ocaml-compiler-libs: dune build] [ocamlfind: ./configure] [ocamlgraph: dune build]
Processing 52/93: [dune-configurator.3.23.0: extract] [pyml.20250807: http] [stdcompat.21.1: http] [cpu: ./configure] [num: make opam-modern] [ocaml-compiler-libs: dune build] [ocamlfind: ./configure] [ocamlgraph: dune build]
Processing 53/93: [dune-configurator.3.23.0: extract] [pyml.20250807: http] [stdcompat.21.1: http] [cpu: ./configure] [num: make opam-modern] [ocaml-compiler-libs: dune build] [ocamlfind: ./configure] [ocamlgraph: dune build] [sexplib0: dune build]
+ /home/opam/.opam/opam-init/hooks/sandbox.sh "build" "./configure" "-bindir" "/home/opam/.opam/5.3-opam/bin" "-sitelib" "/home/opam/.opam/5.3-opam/lib" "-mandir" "/home/opam/.opam/5.3-opam/man" "-config" "/home/opam/.opam/5.3-opam/lib/findlib.conf" "-no-custom" "-no-camlp4" (CWD=/home/opam/.opam/5.3-opam/.opam-switch/build/ocamlfind.1.9.8)
- Welcome to findlib version 1.9.8
- Configuring core...
- Checking for #remove_directory...
- Testing threading model...
- systhread_supported: true
- Testing DLLs...
- Testing whether ppxopt can be supported...
- Checking for ocamlc -opaque...
- Checking for ocamlopt -g...
- Configuring libraries...
- unix: found (in +unix)
- dynlink: found (in +dynlink)
- bigarray: not present (possible since 4.08)
- compiler-libs: found
- dbm: not present (normal since 4.00)
- graphics: not present (normal since 4.09)
- num: not present (normal since 4.06)
- ocamlbuild: not present (normal since 4.03)
- ocamldoc: found (in +ocamldoc)
- raw_spacetime: not present (normal since 4.12)
- threads: found (in +threads)
- str: found (in +str)
- labltk: not present (normal since 4.02)
- native dynlink: found
- camlp4: disabled
- bytes: found, installing fake library
- Configuration for bytes written to site-lib-src/bytes/META
- Detecting compiler arguments: (extractor built) ok
-
- About the OCAML core installation:
- Standard library: /home/opam/.opam/5.3-opam/lib/ocaml
- Binaries: /home/opam/.opam/5.3-opam/bin
- Manual pages: /home/opam/.opam/5.3-opam/man
- Multi-threading type: posix
- The directory of site-specific packages will be
- site-lib: /home/opam/.opam/5.3-opam/lib
- The configuration file is written to:
- findlib config file: /home/opam/.opam/5.3-opam/lib/findlib.conf
- Software will be installed:
- Libraries: in <site-lib>/findlib
- Binaries: /home/opam/.opam/5.3-opam/bin
- Manual pages: /home/opam/.opam/5.3-opam/man
- topfind script: /home/opam/.opam/5.3-opam/lib/ocaml
- Topfind ppxopt support: yes
- Toolbox: no
- Link custom runtime: no
- Need bytes compatibility: no
-
- Configuration has been written to Makefile.config
-
- You can now do 'make all', and optionally 'make opt', to build ocamlfind.
Processing 53/93: [dune-configurator.3.23.0: extract] [pyml.20250807: http] [stdcompat.21.1: http] [cpu: ./configure] [num: make opam-modern] [ocaml-compiler-libs: dune build] [ocamlfind: make all] [ocamlgraph: dune build] [sexplib0: dune build]
Processing 53/93: [dune-configurator.3.23.0: extract] [pyml.20250807: extract] [stdcompat.21.1: http] [cpu: ./configure] [num: make opam-modern] [ocaml-compiler-libs: dune build] [ocamlfind: make all] [ocamlgraph: dune build] [sexplib0: dune build]
-> retrieved pyml.20250807 (https://github.com/ocamllibs/pyml/archive/refs/tags/20250807.tar.gz)
Processing 53/93: [dune-configurator.3.23.0: extract] [stdcompat.21.1: http] [cpu: ./configure] [num: make opam-modern] [ocaml-compiler-libs: dune build] [ocamlfind: make all] [ocamlgraph: dune build] [sexplib0: dune build]
Processing 54/93: [dune-configurator.3.23.0: extract] [stdcompat.21.1: http] [stdlib-shims.0.3.0: extract] [cpu: ./configure] [num: make opam-modern] [ocaml-compiler-libs: dune build] [ocamlfind: make all] [ocamlgraph: dune build] [sexplib0: dune build]
-> retrieved stdlib-shims.0.3.0 (cached)
Processing 54/93: [dune-configurator.3.23.0: extract] [stdcompat.21.1: http] [cpu: ./configure] [num: make opam-modern] [ocaml-compiler-libs: dune build] [ocamlfind: make all] [ocamlgraph: dune build] [sexplib0: dune build]
Processing 55/93: [dune-configurator.3.23.0: extract] [stdcompat.21.1: http] [vector3.1.0.0: extract] [cpu: ./configure] [num: make opam-modern] [ocaml-compiler-libs: dune build] [ocamlfind: make all] [ocamlgraph: dune build] [sexplib0: dune build]
Processing 56/93: [dune-configurator.3.23.0: extract] [stdcompat.21.1: http] [vector3.1.0.0: extract] [cpu: ./configure] [num: make opam-modern] [ocaml-compiler-libs: dune build] [ocamlfind: make all] [ocamlgraph: dune build] [sexplib0: dune build] [stdlib-shims: dune build]
-> retrieved vector3.1.0.0 (cached)
Processing 56/93: [dune-configurator.3.23.0: extract] [stdcompat.21.1: http] [cpu: ./configure] [num: make opam-modern] [ocaml-compiler-libs: dune build] [ocamlfind: make all] [ocamlgraph: dune build] [sexplib0: dune build] [stdlib-shims: dune build]
Processing 57/93: [dune-configurator.3.23.0: extract] [stdcompat.21.1: http] [cpu: ./configure] [num: make opam-modern] [ocaml-compiler-libs: dune build] [ocamlfind: make all] [ocamlgraph: dune build] [sexplib0: dune build] [stdlib-shims: dune build] [vector3: dune build]
Processing 57/93: [dune-configurator.3.23.0: extract] [stdcompat.21.1: extract] [cpu: ./configure] [num: make opam-modern] [ocaml-compiler-libs: dune build] [ocamlfind: make all] [ocamlgraph: dune build] [sexplib0: dune build] [stdlib-shims: dune build] [vector3: dune build]
-> retrieved stdcompat.21.1 (https://github.com/ocamllibs/stdcompat/archive/refs/tags/21.1.tar.gz)
Processing 57/93: [dune-configurator.3.23.0: extract] [cpu: ./configure] [num: make opam-modern] [ocaml-compiler-libs: dune build] [ocamlfind: make all] [ocamlgraph: dune build] [sexplib0: dune build] [stdlib-shims: dune build] [vector3: dune build]
Processing 58/93: [dune-configurator.3.23.0: extract] [cpu: ./configure] [num: make opam-modern] [ocaml-compiler-libs: dune build] [ocamlfind: make all] [ocamlgraph: dune build] [sexplib0: dune build] [stdcompat: dune build] [stdlib-shims: dune build] [vector3: dune build]
-> retrieved dune-configurator.3.23.0 (cached)
Processing 58/93: [cpu: ./configure] [num: make opam-modern] [ocaml-compiler-libs: dune build] [ocamlfind: make all] [ocamlgraph: dune build] [sexplib0: dune build] [stdcompat: dune build] [stdlib-shims: dune build] [vector3: dune build]
Processing 59/93: [cpu: ./configure] [dune-configurator: dune build] [num: make opam-modern] [ocaml-compiler-libs: dune build] [ocamlfind: make all] [ocamlgraph: dune build] [sexplib0: dune build] [stdcompat: dune build] [stdlib-shims: dune build] [vector3: dune build]
+ /home/opam/.opam/opam-init/hooks/sandbox.sh "build" "make" "PROFILE=release" "opam-modern" (CWD=/home/opam/.opam/5.3-opam/.opam-switch/build/num.1.6)
- make -C src all
- make[1]: Entering directory '/home/opam/.opam/5.3-opam/.opam-switch/build/num.1.6/src'
- ocamlc -ccopt -DBNG_ARCH_amd64 -c bng.c
- ocamlc -ccopt -DBNG_ARCH_amd64 -c nat_stubs.c
- ocamlmklib -oc nums bng.o nat_stubs.o
- ocamlc -w +a-4-9-41-42-44-45-48 -bin-annot -g -safe-string -strict-sequence -strict-formats -I +compiler-libs -c int_misc.mli
- ocamlc -w +a-4-9-41-42-44-45-48 -bin-annot -g -safe-string -strict-sequence -strict-formats -I +compiler-libs -c int_misc.ml
- ocamlc -w +a-4-9-41-42-44-45-48 -bin-annot -g -safe-string -strict-sequence -strict-formats -I +compiler-libs -c nat.mli
- ocamlc -w +a-4-9-41-42-44-45-48 -bin-annot -g -safe-string -strict-sequence -strict-formats -I +compiler-libs -c nat.ml
- ocamlc -w +a-4-9-41-42-44-45-48 -bin-annot -g -safe-string -strict-sequence -strict-formats -I +compiler-libs -c big_int.mli
- ocamlc -w +a-4-9-41-42-44-45-48 -bin-annot -g -safe-string -strict-sequence -strict-formats -I +compiler-libs -c big_int.ml
- ocamlc -w +a-4-9-41-42-44-45-48 -bin-annot -g -safe-string -strict-sequence -strict-formats -I +compiler-libs -c arith_flags.mli
- ocamlc -w +a-4-9-41-42-44-45-48 -bin-annot -g -safe-string -strict-sequence -strict-formats -I +compiler-libs -c arith_flags.ml
- ocamlc -w +a-4-9-41-42-44-45-48 -bin-annot -g -safe-string -strict-sequence -strict-formats -I +compiler-libs -c ratio.mli
- ocamlc -w +a-4-9-41-42-44-45-48 -bin-annot -g -safe-string -strict-sequence -strict-formats -I +compiler-libs -c ratio.ml
- ocamlc -w +a-4-9-41-42-44-45-48 -bin-annot -g -safe-string -strict-sequence -strict-formats -I +compiler-libs -c num.mli
- ocamlc -w +a-4-9-41-42-44-45-48 -bin-annot -g -safe-string -strict-sequence -strict-formats -I +compiler-libs -c num.ml
- ocamlc -w +a-4-9-41-42-44-45-48 -bin-annot -g -safe-string -strict-sequence -strict-formats -I +compiler-libs -c arith_status.mli
- ocamlc -w +a-4-9-41-42-44-45-48 -bin-annot -g -safe-string -strict-sequence -strict-formats -I +compiler-libs -c arith_status.ml
- ocamlmklib -o nums -oc nums -linkall int_misc.cmo nat.cmo big_int.cmo arith_flags.cmo ratio.cmo num.cmo arith_status.cmo
- cp ../toplevel/num_top_printers.mli ../toplevel/num_top.mli ../toplevel/num_top_printers.ml ../toplevel/num_top.ml .
- ocamlc -w +a-4-9-41-42-44-45-48 -bin-annot -g -safe-string -strict-sequence -strict-formats -I +compiler-libs -c num_top_printers.mli
- ocamlc -w +a-4-9-41-42-44-45-48 -bin-annot -g -safe-string -strict-sequence -strict-formats -I +compiler-libs -c num_top_printers.ml
- ocamlc -w +a-4-9-41-42-44-45-48 -bin-annot -g -safe-string -strict-sequence -strict-formats -I +compiler-libs -c num_top.mli
- ocamlc -w +a-4-9-41-42-44-45-48 -bin-annot -g -safe-string -strict-sequence -strict-formats -I +compiler-libs -c num_top.ml
- ocamlc -w +a-4-9-41-42-44-45-48 -bin-annot -g -safe-string -strict-sequence -strict-formats -I +compiler-libs -a -o num_top.cma num_top_printers.cmo num_top.cmo
- echo 'version = "1.7~dev"' > META.top
- cat META.num-top.in >> META.top
- ocamlopt -w +a-4-9-41-42-44-45-48 -bin-annot -g -safe-string -strict-sequence -strict-formats -I +compiler-libs -c int_misc.ml
- ocamlopt -w +a-4-9-41-42-44-45-48 -bin-annot -g -safe-string -strict-sequence -strict-formats -I +compiler-libs -c nat.ml
- ocamlopt -w +a-4-9-41-42-44-45-48 -bin-annot -g -safe-string -strict-sequence -strict-formats -I +compiler-libs -c big_int.ml
- ocamlopt -w +a-4-9-41-42-44-45-48 -bin-annot -g -safe-string -strict-sequence -strict-formats -I +compiler-libs -c arith_flags.ml
- ocamlopt -w +a-4-9-41-42-44-45-48 -bin-annot -g -safe-string -strict-sequence -strict-formats -I +compiler-libs -c ratio.ml
- ocamlopt -w +a-4-9-41-42-44-45-48 -bin-annot -g -safe-string -strict-sequence -strict-formats -I +compiler-libs -c num.ml
- ocamlopt -w +a-4-9-41-42-44-45-48 -bin-annot -g -safe-string -strict-sequence -strict-formats -I +compiler-libs -c arith_status.ml
- ocamlmklib -o nums -oc nums -linkall int_misc.cmx nat.cmx big_int.cmx arith_flags.cmx ratio.cmx num.cmx arith_status.cmx
- ocamlopt -w +a-4-9-41-42-44-45-48 -bin-annot -g -safe-string -strict-sequence -strict-formats -I +compiler-libs -I . -shared -o nums.cmxs nums.cmxa
- make[1]: Leaving directory '/home/opam/.opam/5.3-opam/.opam-switch/build/num.1.6/src'
- cp src/num-modern.install num.install
-> compiled num.1.6
Processing 59/93: [cpu: ./configure] [dune-configurator: dune build] [ocaml-compiler-libs: dune build] [ocamlfind: make all] [ocamlgraph: dune build] [sexplib0: dune build] [stdcompat: dune build] [stdlib-shims: dune build] [vector3: dune build]
-> installed num.1.6
Processing 60/93: [cpu: ./configure] [dune-configurator: dune build] [ocaml-compiler-libs: dune build] [ocamlfind: make all] [ocamlgraph: dune build] [sexplib0: dune build] [stdcompat: dune build] [stdlib-shims: dune build] [vector3: dune build]
+ /home/opam/.opam/opam-init/hooks/sandbox.sh "build" "dune" "build" "-p" "ocaml-compiler-libs" "-j" "71" (CWD=/home/opam/.opam/5.3-opam/.opam-switch/build/ocaml-compiler-libs.v0.17.0)
-> compiled ocaml-compiler-libs.v0.17.0
Processing 60/93: [cpu: ./configure] [dune-configurator: dune build] [ocamlfind: make all] [ocamlgraph: dune build] [sexplib0: dune build] [stdcompat: dune build] [stdlib-shims: dune build] [vector3: dune build]
-> installed ocaml-compiler-libs.v0.17.0
Processing 61/93: [cpu: ./configure] [dune-configurator: dune build] [ocamlfind: make all] [ocamlgraph: dune build] [sexplib0: dune build] [stdcompat: dune build] [stdlib-shims: dune build] [vector3: dune build]
+ /home/opam/.opam/opam-init/hooks/sandbox.sh "build" "dune" "build" "-p" "ocamlgraph" "-j" "71" "@install" (CWD=/home/opam/.opam/5.3-opam/.opam-switch/build/ocamlgraph.2.2.0)
-> compiled ocamlgraph.2.2.0
Processing 61/93: [cpu: ./configure] [dune-configurator: dune build] [ocamlfind: make all] [sexplib0: dune build] [stdcompat: dune build] [stdlib-shims: dune build] [vector3: dune build]
-> installed ocamlgraph.2.2.0
Processing 62/93: [cpu: ./configure] [dune-configurator: dune build] [ocamlfind: make all] [sexplib0: dune build] [stdcompat: dune build] [stdlib-shims: dune build] [vector3: dune build]
+ /home/opam/.opam/opam-init/hooks/sandbox.sh "build" "./configure" (CWD=/home/opam/.opam/5.3-opam/.opam-switch/build/cpu.2.0.0)
- checking for ocamlc... ocamlc
- OCaml version is 5.3.0
- OCaml library path is /home/opam/.opam/5.3-opam/lib/ocaml
- checking for ocamlopt... ocamlopt
- checking for ocamlc.opt... ocamlc.opt
- checking for ocamlopt.opt... ocamlopt.opt
- checking for dynlink.cmxa... no
- checking for ocaml... ocaml
- checking for ocamldep... ocamldep
- checking for ocamlmktop... ocamlmktop
- checking for ocamlmklib... ocamlmklib
- checking for ocamldoc... ocamldoc
- checking for ocamlbuild... no
- checking for gcc... gcc
- checking whether the C compiler works... yes
- checking for C compiler default output file name... a.out
- checking for suffix of executables...
- checking whether we are cross compiling... no
- checking for suffix of object files... o
- checking whether the compiler supports GNU C... yes
- checking whether gcc accepts -g... yes
- checking for gcc option to enable C23 features... none needed
- checking for stdio.h... yes
- checking for stdlib.h... yes
- checking for string.h... yes
- checking for inttypes.h... yes
- checking for stdint.h... yes
- checking for strings.h... yes
- checking for sys/stat.h... yes
- checking for sys/types.h... yes
- checking for unistd.h... yes
- checking for grep that handles long lines and -e... /usr/bin/grep
- checking for egrep... /usr/bin/grep -E
- checking for sched.h... yes
- checking for gcc options to detect undeclared functions... none needed
- checking for gcc options to ignore future-version functions... none needed
- checking whether sched_setaffinity is declared... yes
- checking for mach/thread_policy.h... no
- checking whether thread_policy_set is declared... no
- configure: creating ./config.status
- config.status: creating src/config.h
Processing 62/93: [cpu: dune build] [dune-configurator: dune build] [ocamlfind: make all] [sexplib0: dune build] [stdcompat: dune build] [stdlib-shims: dune build] [vector3: dune build]
+ /home/opam/.opam/opam-init/hooks/sandbox.sh "build" "dune" "build" "-p" "sexplib0" "-j" "71" (CWD=/home/opam/.opam/5.3-opam/.opam-switch/build/sexplib0.v0.17.0)
-> compiled sexplib0.v0.17.0
Processing 62/93: [cpu: dune build] [dune-configurator: dune build] [ocamlfind: make all] [stdcompat: dune build] [stdlib-shims: dune build] [vector3: dune build]
-> installed sexplib0.v0.17.0
Processing 63/93: [cpu: dune build] [dune-configurator: dune build] [ocamlfind: make all] [stdcompat: dune build] [stdlib-shims: dune build] [vector3: dune build]
+ /home/opam/.opam/opam-init/hooks/sandbox.sh "build" "make" "all" (CWD=/home/opam/.opam/5.3-opam/.opam-switch/build/ocamlfind.1.9.8)
- for p in findlib; do ( cd src/$p; make all ) || exit; done
- make[1]: Entering directory '/home/opam/.opam/5.3-opam/.opam-switch/build/ocamlfind.1.9.8/src/findlib'
- ocamllex fl_meta.mll
- 22 states, 392 transitions, table size 1700 bytes
- USE_CYGPATH="0"; \
- export USE_CYGPATH; \
- cat findlib_config.mlp | \
- ../../tools/patch '@CONFIGFILE@' '/home/opam/.opam/5.3-opam/lib/findlib.conf' | \
- ../../tools/patch '@STDLIB@' '/home/opam/.opam/5.3-opam/lib/ocaml' | \
- ../../tools/patch '@RELATIVE_PATHS@' 'false' | \
- sed -e 's;@AUTOLINK@;true;g' \
- -e 's;@SYSTEM@;linux;g' \
- >findlib_config.ml
- if [ "true" = "true" ]; then \
- cp topfind.ml.in topfind.ml; \
- else \
- sed -e '/PPXOPT_BEGIN/,/PPXOPT_END/ d' topfind.ml.in \
- > topfind.ml ; \
- fi
- ocamldep *.ml *.mli >depend
- ocamlc -I +compiler-libs -opaque -I +unix -I +dynlink -g -c fl_compat.ml
- ocamlc -I +compiler-libs -opaque -I +unix -I +dynlink -g -c fl_split.ml
- ocamlc -I +compiler-libs -opaque -I +unix -I +dynlink -g -c findlib_config.ml
- ocamlc -I +compiler-libs -opaque -I +unix -I +dynlink -g -c fl_metatoken.ml
- ocamlc -I +compiler-libs -opaque -I +unix -I +dynlink -g -c fl_meta.ml
- ocamlc -I +compiler-libs -opaque -I +unix -I +dynlink -c fl_metascanner.mli
- ocamlc -I +compiler-libs -opaque -I +unix -I +dynlink -g -c fl_metascanner.ml
- ocamlc -I +compiler-libs -opaque -I +unix -I +dynlink -c fl_topo.mli
- ocamlc -I +compiler-libs -opaque -I +unix -I +dynlink -g -c fl_topo.ml
- ocamlc -I +compiler-libs -opaque -I +unix -I +dynlink -c fl_package_base.mli
- ocamlc -I +compiler-libs -opaque -I +unix -I +dynlink -g -c fl_package_base.ml
- ocamlc -I +compiler-libs -opaque -I +unix -I +dynlink -c findlib.mli
- ocamlc -I +compiler-libs -opaque -I +unix -I +dynlink -g -c findlib.ml
- ocamlc -I +compiler-libs -opaque -I +unix -I +dynlink -g -c fl_args.ml
- ocamlc -I +compiler-libs -opaque -I +unix -I +dynlink -g -c fl_lint.ml
- ocamlc -I +compiler-libs -a -o findlib.cma fl_compat.cmo fl_split.cmo findlib_config.cmo fl_metatoken.cmo fl_meta.cmo fl_metascanner.cmo fl_topo.cmo fl_package_base.cmo findlib.cmo fl_args.cmo fl_lint.cmo
- ocamlc -I +compiler-libs -opaque -I +unix -I +dynlink -g -c ocaml_args.ml
- ocamlc -I +compiler-libs -opaque -I +unix -I +dynlink -g -c frontend.ml
- ocamlc -I +compiler-libs -o ocamlfind -g findlib.cma unix.cma \
- -I +unix -I +dynlink ocaml_args.cmo frontend.cmo
- ocamlc -I +compiler-libs -opaque -I +unix -I +dynlink -c topfind.mli
- ocamlc -I +compiler-libs -opaque -I +unix -I +dynlink -g -c topfind.ml
- File "topfind.ml", line 128, characters 40-63:
- 128 | match Hashtbl.find Toploop.directive_table "ppx" with
- ^^^^^^^^^^^^^^^^^^^^^^^
- Alert deprecated: Toploop.directive_table
-
- File "topfind.ml", line 258, characters 4-27:
- 258 | Toploop.directive_table
- ^^^^^^^^^^^^^^^^^^^^^^^
- Alert deprecated: Toploop.directive_table
-
- File "topfind.ml", line 268, characters 4-27:
- 268 | Toploop.directive_table
- ^^^^^^^^^^^^^^^^^^^^^^^
- Alert deprecated: Toploop.directive_table
-
- File "topfind.ml", line 280, characters 4-27:
- 280 | Toploop.directive_table
- ^^^^^^^^^^^^^^^^^^^^^^^
- Alert deprecated: Toploop.directive_table
-
- File "topfind.ml", line 293, characters 4-27:
- 293 | Toploop.directive_table
- ^^^^^^^^^^^^^^^^^^^^^^^
- Alert deprecated: Toploop.directive_table
-
- File "topfind.ml", line 307, characters 4-27:
- 307 | Toploop.directive_table
- ^^^^^^^^^^^^^^^^^^^^^^^
- Alert deprecated: Toploop.directive_table
-
- File "topfind.ml", line 319, characters 4-27:
- 319 | Toploop.directive_table
- ^^^^^^^^^^^^^^^^^^^^^^^
- Alert deprecated: Toploop.directive_table
- ocamlc -I +compiler-libs -a -o findlib_top.cma topfind.cmo
- if [ "1" = "1" ]; then \
- cp topfind.in topfind.compat.in; \
- else \
- sed -e '/REMOVE_DIRECTORY_BEGIN/,/REMOVE_DIRECTORY_END/ d' topfind.in \
- > topfind.compat.in ; \
- fi
- USE_CYGPATH="0"; \
- export USE_CYGPATH; \
- cat topfind.compat.in | \
- ../../tools/patch '@SITELIB@' '/home/opam/.opam/5.3-opam/lib' | \
- ../../tools/patch '@RELATIVE_PATHS@' 'false' \
- >topfind
- ocamlc -I +compiler-libs -opaque -I +unix -I +dynlink -c fl_dynload.mli
- ocamlc -I +compiler-libs -opaque -I +unix -I +dynlink -g -c fl_dynload.ml
- ocamlc -I +compiler-libs -a -o findlib_dynload.cma fl_dynload.cmo
- make[1]: Leaving directory '/home/opam/.opam/5.3-opam/.opam-switch/build/ocamlfind.1.9.8/src/findlib'
- make all-config
- make[1]: Entering directory '/home/opam/.opam/5.3-opam/.opam-switch/build/ocamlfind.1.9.8'
- if [ "false" = "true" ]; then \
- make findlib-relative; \
- else \
- make findlib-absolute; \
- fi
- make[2]: Entering directory '/home/opam/.opam/5.3-opam/.opam-switch/build/ocamlfind.1.9.8'
- USE_CYGPATH="0"; \
- export USE_CYGPATH; \
- cat findlib.conf.in | \
- tools/patch '@SITELIB@' '/home/opam/.opam/5.3-opam/lib' | \
- tools/patch '@FINDLIB_PATH@' '/home/opam/.opam/5.3-opam/lib/ocaml:/home/opam/.opam/5.3-opam/lib' -p >findlib.conf
- if ./tools/cmd_from_same_dir ocamlc; then \
- echo 'ocamlc="ocamlc.opt"' >>findlib.conf; \
- fi
- if ./tools/cmd_from_same_dir ocamlopt; then \
- echo 'ocamlopt="ocamlopt.opt"' >>findlib.conf; \
- fi
- if ./tools/cmd_from_same_dir ocamldep; then \
- echo 'ocamldep="ocamldep.opt"' >>findlib.conf; \
- fi
- if ./tools/cmd_from_same_dir ocamldoc; then \
- echo 'ocamldoc="ocamldoc.opt"' >>findlib.conf; \
- fi
- make[2]: Leaving directory '/home/opam/.opam/5.3-opam/.opam-switch/build/ocamlfind.1.9.8'
- make[1]: Leaving directory '/home/opam/.opam/5.3-opam/.opam-switch/build/ocamlfind.1.9.8'
Processing 63/93: [cpu: dune build] [dune-configurator: dune build] [ocamlfind: make opt] [stdcompat: dune build] [stdlib-shims: dune build] [vector3: dune build]
+ /home/opam/.opam/opam-init/hooks/sandbox.sh "build" "dune" "build" "-p" "stdlib-shims" "-j" "71" (CWD=/home/opam/.opam/5.3-opam/.opam-switch/build/stdlib-shims.0.3.0)
-> compiled stdlib-shims.0.3.0
Processing 63/93: [cpu: dune build] [dune-configurator: dune build] [ocamlfind: make opt] [stdcompat: dune build] [vector3: dune build]
-> installed stdlib-shims.0.3.0
Processing 64/93: [cpu: dune build] [dune-configurator: dune build] [ocamlfind: make opt] [stdcompat: dune build] [vector3: dune build]
Processing 65/93: [cpu: dune build] [dune-configurator: dune build] [ocamlfind: make opt] [ppxlib: dune build] [stdcompat: dune build] [vector3: dune build]
+ /home/opam/.opam/opam-init/hooks/sandbox.sh "build" "dune" "build" "-p" "vector3" "-j" "71" (CWD=/home/opam/.opam/5.3-opam/.opam-switch/build/vector3.1.0.0)
-> compiled vector3.1.0.0
Processing 65/93: [cpu: dune build] [dune-configurator: dune build] [ocamlfind: make opt] [ppxlib: dune build] [stdcompat: dune build]
-> installed vector3.1.0.0
Processing 66/93: [cpu: dune build] [dune-configurator: dune build] [ocamlfind: make opt] [ppxlib: dune build] [stdcompat: dune build]
+ /home/opam/.opam/opam-init/hooks/sandbox.sh "build" "dune" "build" "-p" "stdcompat" "-j" "71" (CWD=/home/opam/.opam/5.3-opam/.opam-switch/build/stdcompat.21.1)
-> compiled stdcompat.21.1
Processing 66/93: [cpu: dune build] [dune-configurator: dune build] [ocamlfind: make opt] [ppxlib: dune build]
-> installed stdcompat.21.1
Processing 67/93: [cpu: dune build] [dune-configurator: dune build] [ocamlfind: make opt] [ppxlib: dune build]
+ /home/opam/.opam/opam-init/hooks/sandbox.sh "build" "dune" "build" "-p" "cpu" "-j" "71" (CWD=/home/opam/.opam/5.3-opam/.opam-switch/build/cpu.2.0.0)
-> compiled cpu.2.0.0
Processing 67/93: [dune-configurator: dune build] [ocamlfind: make opt] [ppxlib: dune build]
-> installed cpu.2.0.0
Processing 68/93: [dune-configurator: dune build] [ocamlfind: make opt] [ppxlib: dune build]
Processing 69/93: [dune-configurator: dune build] [ocamlfind: make opt] [parany: dune build] [ppxlib: dune build]
+ /home/opam/.opam/opam-init/hooks/sandbox.sh "build" "dune" "build" "-p" "parany" "-j" "71" (CWD=/home/opam/.opam/5.3-opam/.opam-switch/build/parany.14.0.1)
-> compiled parany.14.0.1
Processing 69/93: [dune-configurator: dune build] [ocamlfind: make opt] [ppxlib: dune build]
-> installed parany.14.0.1
Processing 70/93: [dune-configurator: dune build] [ocamlfind: make opt] [ppxlib: dune build]
+ /home/opam/.opam/opam-init/hooks/sandbox.sh "build" "dune" "build" "-p" "dune-configurator" "-j" "71" "@install" (CWD=/home/opam/.opam/5.3-opam/.opam-switch/build/dune-configurator.3.23.0)
-> compiled dune-configurator.3.23.0
Processing 70/93: [ocamlfind: make opt] [ppxlib: dune build]
-> installed dune-configurator.3.23.0
Processing 71/93: [ocamlfind: make opt] [ppxlib: dune build]
+ /home/opam/.opam/opam-init/hooks/sandbox.sh "build" "make" "opt" (CWD=/home/opam/.opam/5.3-opam/.opam-switch/build/ocamlfind.1.9.8)
- for p in findlib; do ( cd src/$p; make opt ) || exit; done
- make[1]: Entering directory '/home/opam/.opam/5.3-opam/.opam-switch/build/ocamlfind.1.9.8/src/findlib'
- ocamlopt -I +compiler-libs -g -opaque -I +unix -I +dynlink -c fl_compat.ml
- ocamlopt -I +compiler-libs -g -opaque -I +unix -I +dynlink -c fl_split.ml
- ocamlopt -I +compiler-libs -g -opaque -I +unix -I +dynlink -c findlib_config.ml
- ocamlopt -I +compiler-libs -g -opaque -I +unix -I +dynlink -c fl_metatoken.ml
- ocamlopt -I +compiler-libs -g -opaque -I +unix -I +dynlink -c fl_meta.ml
- ocamlopt -I +compiler-libs -g -opaque -I +unix -I +dynlink -c fl_metascanner.ml
- ocamlopt -I +compiler-libs -g -opaque -I +unix -I +dynlink -c fl_topo.ml
- ocamlopt -I +compiler-libs -g -opaque -I +unix -I +dynlink -c fl_package_base.ml
- ocamlopt -I +compiler-libs -g -opaque -I +unix -I +dynlink -c findlib.ml
- ocamlopt -I +compiler-libs -g -opaque -I +unix -I +dynlink -c fl_args.ml
- ocamlopt -I +compiler-libs -g -opaque -I +unix -I +dynlink -c fl_lint.ml
- ocamlopt -I +compiler-libs -g -a -o findlib.cmxa fl_compat.cmx fl_split.cmx findlib_config.cmx fl_metatoken.cmx fl_meta.cmx fl_metascanner.cmx fl_topo.cmx fl_package_base.cmx findlib.cmx fl_args.cmx fl_lint.cmx
- if [ 1 -gt 0 ]; then \
- ocamlopt -I +compiler-libs -g -shared -o findlib.cmxs fl_compat.cmx fl_split.cmx findlib_config.cmx fl_metatoken.cmx fl_meta.cmx fl_metascanner.cmx fl_topo.cmx fl_package_base.cmx findlib.cmx fl_args.cmx fl_lint.cmx; \
- fi
- ocamlopt -I +compiler-libs -g -opaque -I +unix -I +dynlink -c ocaml_args.ml
- ocamlopt -I +compiler-libs -g -opaque -I +unix -I +dynlink -c frontend.ml
- ocamlopt -I +compiler-libs -g -o ocamlfind_opt findlib.cmxa unix.cmxa \
- -I +unix -I +dynlink ocaml_args.cmx frontend.cmx
- ocamlopt -I +compiler-libs -g -opaque -I +unix -I +dynlink -c topfind.ml
- File "topfind.ml", line 128, characters 40-63:
- 128 | match Hashtbl.find Toploop.directive_table "ppx" with
- ^^^^^^^^^^^^^^^^^^^^^^^
- Alert deprecated: Toploop.directive_table
-
- File "topfind.ml", line 258, characters 4-27:
- 258 | Toploop.directive_table
- ^^^^^^^^^^^^^^^^^^^^^^^
- Alert deprecated: Toploop.directive_table
-
- File "topfind.ml", line 268, characters 4-27:
- 268 | Toploop.directive_table
- ^^^^^^^^^^^^^^^^^^^^^^^
- Alert deprecated: Toploop.directive_table
-
- File "topfind.ml", line 280, characters 4-27:
- 280 | Toploop.directive_table
- ^^^^^^^^^^^^^^^^^^^^^^^
- Alert deprecated: Toploop.directive_table
-
- File "topfind.ml", line 293, characters 4-27:
- 293 | Toploop.directive_table
- ^^^^^^^^^^^^^^^^^^^^^^^
- Alert deprecated: Toploop.directive_table
-
- File "topfind.ml", line 307, characters 4-27:
- 307 | Toploop.directive_table
- ^^^^^^^^^^^^^^^^^^^^^^^
- Alert deprecated: Toploop.directive_table
-
- File "topfind.ml", line 319, characters 4-27:
- 319 | Toploop.directive_table
- ^^^^^^^^^^^^^^^^^^^^^^^
- Alert deprecated: Toploop.directive_table
- ocamlopt -I +compiler-libs -g -a -o findlib_top.cmxa topfind.cmx
- if [ 1 -gt 0 ]; then \
- ocamlopt -I +compiler-libs -g -shared -o findlib_top.cmxs topfind.cmx; \
- fi
- ocamlopt -I +compiler-libs -g -opaque -I +unix -I +dynlink -c fl_dynload.ml
- ocamlopt -I +compiler-libs -g -a -o findlib_dynload.cmxa fl_dynload.cmx
- if [ 1 -gt 0 ]; then \
- ocamlopt -I +compiler-libs -g -shared -o findlib_dynload.cmxs fl_dynload.cmx; \
- fi
- make[1]: Leaving directory '/home/opam/.opam/5.3-opam/.opam-switch/build/ocamlfind.1.9.8/src/findlib'
-> compiled ocamlfind.1.9.8
Processing 71/93: [ppxlib: dune build]
Processing 72/93: [ppxlib: dune build] [ocamlfind: make install]
+ /home/opam/.opam/opam-init/hooks/sandbox.sh "install" "make" "install" (CWD=/home/opam/.opam/5.3-opam/.opam-switch/build/ocamlfind.1.9.8)
- if [ "0" -eq 1 ]; then \
- for x in camlp4 dbm graphics labltk num ocamlbuild; do \
- if [ -f "/home/opam/.opam/5.3-opam/lib/$x/META" ]; then \
- if ! grep -Fq '[distributed with Ocaml]' "//home/opam/.opam/5.3-opam/lib/$x/META"; then \
- rm -f site-lib-src/$x/META; \
- fi; \
- fi; \
- done; \
- test -f "site-lib-src/num/META" || rm -f "site-lib-src/num-top/META"; \
- fi
- echo 'SITELIB_META =' > Makefile.packages.in
- for x in `ls site-lib-src`; do test ! -f "site-lib-src/$x/META" || echo $x >> Makefile.packages.in; done
- tr '\n' ' ' < Makefile.packages.in > Makefile.packages
- rm Makefile.packages.in
- install -d "/home/opam/.opam/5.3-opam/bin"
- install -d "/home/opam/.opam/5.3-opam/man"
- make install-config
- make[1]: Entering directory '/home/opam/.opam/5.3-opam/.opam-switch/build/ocamlfind.1.9.8'
- install -d "`dirname \"/home/opam/.opam/5.3-opam/lib/findlib.conf\"`"
- test -f "/home/opam/.opam/5.3-opam/lib/findlib.conf" || cp findlib.conf "/home/opam/.opam/5.3-opam/lib/findlib.conf"
- make[1]: Leaving directory '/home/opam/.opam/5.3-opam/.opam-switch/build/ocamlfind.1.9.8'
- for p in findlib; do ( cd src/$p; make install ); done
- make[1]: Entering directory '/home/opam/.opam/5.3-opam/.opam-switch/build/ocamlfind.1.9.8/src/findlib'
- install -d "/home/opam/.opam/5.3-opam/lib/findlib"
- install -d "/home/opam/.opam/5.3-opam/bin"
- test 1 -eq 0 || install -d "/home/opam/.opam/5.3-opam/lib/ocaml"
- test 1 -eq 0 || cp topfind "/home/opam/.opam/5.3-opam/lib/ocaml/"
- files=` ../../tools/collect_files ../../Makefile.config \
- findlib.cmi findlib.mli findlib.cma findlib.cmxa findlib.a findlib.cmxs \
- findlib_config.cmi findlib_config.ml topfind.cmi topfind.mli \
- fl_args.cmi fl_lint.cmi fl_meta.cmi fl_split.cmi fl_topo.cmi ocaml_args.cmi \
- fl_package_base.mli fl_package_base.cmi fl_metascanner.mli fl_metascanner.cmi \
- fl_metatoken.cmi findlib_top.cma findlib_top.cmxa findlib_top.a findlib_top.cmxs \
- findlib_dynload.cma findlib_dynload.cmxa findlib_dynload.a findlib_dynload.cmxs fl_dynload.mli fl_dynload.cmi \
- META` && \
- cp $files "/home/opam/.opam/5.3-opam/lib/findlib/"
- f="ocamlfind"; { test -f ocamlfind_opt && f="ocamlfind_opt"; }; \
- install -c $f "/home/opam/.opam/5.3-opam/bin/ocamlfind"
- # the following "if" block is only needed for 4.00beta2
- if [ 1 -eq 0 -a -f "/home/opam/.opam/5.3-opam/lib/ocaml/compiler-libs/topdirs.cmi" ]; then \
- cd "/home/opam/.opam/5.3-opam/lib/ocaml/compiler-libs/"; \
- cp topdirs.cmi toploop.cmi "/home/opam/.opam/5.3-opam/lib/findlib/"; \
- fi
- make[1]: Leaving directory '/home/opam/.opam/5.3-opam/.opam-switch/build/ocamlfind.1.9.8/src/findlib'
- make install-meta
- make[1]: Entering directory '/home/opam/.opam/5.3-opam/.opam-switch/build/ocamlfind.1.9.8'
- for x in bytes ; do install -d "/home/opam/.opam/5.3-opam/lib/$x"; cp site-lib-src/$x/META "/home/opam/.opam/5.3-opam/lib/$x/META.tmp" && mv "/home/opam/.opam/5.3-opam/lib/$x/META.tmp" "/home/opam/.opam/5.3-opam/lib/$x/META"; done
- install -d "/home/opam/.opam/5.3-opam/lib/findlib"; cp Makefile.packages "/home/opam/.opam/5.3-opam/lib/findlib/Makefile.packages"
- make[1]: Leaving directory '/home/opam/.opam/5.3-opam/.opam-switch/build/ocamlfind.1.9.8'
- test ! -f 'site-lib-src/num-top/META' || { cd src/findlib; make install-num-top; }
- test ! -f 'site-lib-src/camlp4/META' || install -c tools/safe_camlp4 "/home/opam/.opam/5.3-opam/bin"
- make install-doc
- make[1]: Entering directory '/home/opam/.opam/5.3-opam/.opam-switch/build/ocamlfind.1.9.8'
- install -d "/home/opam/.opam/5.3-opam/man/man1" "/home/opam/.opam/5.3-opam/man/man3" "/home/opam/.opam/5.3-opam/man/man5"
- cp doc/ref-man/ocamlfind.1 "/home/opam/.opam/5.3-opam/man/man1"
- cp: cannot stat 'doc/ref-man/ocamlfind.1': No such file or directory
- make[1]: [Makefile:91: install-doc] Error 1 (ignored)
- cp doc/ref-man/META.5 doc/ref-man/site-lib.5 doc/ref-man/findlib.conf.5 "/home/opam/.opam/5.3-opam/man/man5"
- cp: cannot stat 'doc/ref-man/META.5': No such file or directory
- cp: cannot stat 'doc/ref-man/site-lib.5': No such file or directory
- cp: cannot stat 'doc/ref-man/findlib.conf.5': No such file or directory
- make[1]: [Makefile:92: install-doc] Error 1 (ignored)
- make[1]: Leaving directory '/home/opam/.opam/5.3-opam/.opam-switch/build/ocamlfind.1.9.8'
-> installed ocamlfind.1.9.8
Processing 72/93: [ppxlib: dune build]
Processing 73/93: [ppxlib: dune build]
Processing 74/93: [batteries: dune build] [ppxlib: dune build]
Processing 75/93: [batteries: dune build] [ppxlib: dune build] [pyml: dune build]
-> installed base-bytes.base
Processing 76/93: [batteries: dune build] [ppxlib: dune build] [pyml: dune build]
+ /home/opam/.opam/opam-init/hooks/sandbox.sh "build" "dune" "build" "-p" "pyml" "-j" "71" "@install" (CWD=/home/opam/.opam/5.3-opam/.opam-switch/build/pyml.20250807)
-> compiled pyml.20250807
Processing 76/93: [batteries: dune build] [ppxlib: dune build]
-> installed pyml.20250807
Processing 77/93: [batteries: dune build] [ppxlib: dune build]
+ /home/opam/.opam/opam-init/hooks/sandbox.sh "build" "dune" "build" "-p" "batteries" "-j" "71" "@install" (CWD=/home/opam/.opam/5.3-opam/.opam-switch/build/batteries.3.10.0)
-> compiled batteries.3.10.0
Processing 77/93: [ppxlib: dune build]
-> installed batteries.3.10.0
Processing 78/93: [ppxlib: dune build]
Processing 79/93: [bst: dune build] [ppxlib: dune build]
Processing 80/93: [bst: dune build] [cpm: dune build] [ppxlib: dune build]
Processing 81/93: [bst: dune build] [cpm: dune build] [line_oriented: dune build] [ppxlib: dune build]
+ /home/opam/.opam/opam-init/hooks/sandbox.sh "build" "dune" "build" "-p" "line_oriented" "-j" "71" (CWD=/home/opam/.opam/5.3-opam/.opam-switch/build/line_oriented.1.3.0)
-> compiled line_oriented.1.3.0
Processing 81/93: [bst: dune build] [cpm: dune build] [ppxlib: dune build]
-> installed line_oriented.1.3.0
Processing 82/93: [bst: dune build] [cpm: dune build] [ppxlib: dune build]
+ /home/opam/.opam/opam-init/hooks/sandbox.sh "build" "dune" "build" "-p" "bst" "-j" "71" (CWD=/home/opam/.opam/5.3-opam/.opam-switch/build/bst.7.1.0)
-> compiled bst.7.1.0
Processing 82/93: [cpm: dune build] [ppxlib: dune build]
-> installed bst.7.1.0
Processing 83/93: [cpm: dune build] [ppxlib: dune build]
+ /home/opam/.opam/opam-init/hooks/sandbox.sh "build" "dune" "build" "-p" "cpm" "-j" "71" (CWD=/home/opam/.opam/5.3-opam/.opam-switch/build/cpm.12.2.0)
-> compiled cpm.12.2.0
Processing 83/93: [ppxlib: dune build]
-> installed cpm.12.2.0
Processing 84/93: [ppxlib: dune build]
+ /home/opam/.opam/opam-init/hooks/sandbox.sh "build" "dune" "build" "-p" "ppxlib" "-j" "71" "@install" (CWD=/home/opam/.opam/5.3-opam/.opam-switch/build/ppxlib.0.38.0)
- File "dune-project", line 23, characters 2-42:
- 23 | (sexplib0 (and :with-test (>= "v0.15"))) ; Printexc.register_printer in sexplib0 changed
- ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
- Warning: Duplicate dependency on package (sexplib0 (and :with-test (>=
- v0.15))) in 'depends' field. If you want to specify multiple constraints,
- combine them using (and ...).
- Hint: To disable this warning, add the following to your dune-project file:
- (warnings (duplicate_deps disabled))
-> compiled ppxlib.0.38.0
-> installed ppxlib.0.38.0
Processing 86/93: [extunix: dune build]
+ /home/opam/.opam/opam-init/hooks/sandbox.sh "build" "dune" "build" "-p" "extunix" "-j" "71" "@install" (CWD=/home/opam/.opam/5.3-opam/.opam-switch/build/extunix.0.4.4)
- (cd _build/default/src && ../discover/discover.exe)
- checking EVENTFD.............ok
- checking ATFILE..............ok
- checking RENAMEAT2...........ok
- checking RENAME_WHITEOUT.....ok
- checking DIRFD...............ok
- checking STATVFS.............ok
- checking FSTATVFS............ok
- checking SIOCGIFCONF.........ok
- checking IFADDRS.............ok
- checking INET_NTOA...........ok
- checking INET_NTOP...........ok
- checking UNAME...............ok
- checking FADVISE.............ok
- checking FALLOCATE...........ok
- checking TTY_IOCTL...........ok
- checking TTYNAME.............ok
- checking CTERMID.............ok
- checking GETTID..............ok
- checking PGID................ok
- checking SETREUID............ok
- checking FSYNC...............ok
- checking FDATASYNC...........ok
- checking SYNC................ok
- checking SYNCFS..............ok
- checking REALPATH............ok
- checking SIGNALFD............ok
- checking PTRACE..............ok
- checking RESOURCE............ok
- checking MLOCKALL............ok
- checking STRPTIME............ok
- checking STRTIME.............ok
- checking TIMEZONE............ok
- checking TIMEGM..............ok
- checking PTS.................ok
- checking FCNTL...............ok
- checking TCPGRP..............ok
- checking EXECINFO............ok
- checking SETENV..............ok
- checking CLEARENV............ok
- checking MKDTEMP.............ok
- checking MALLOC_INFO.........ok
- checking MALLOC_STATS........ok
- checking MEMALIGN............ok
- checking ENDIAN..............ok
- checking READ_CREDENTIALS....ok
- checking FEXECVE.............ok
- checking SENDMSG.............ok
- checking PREAD...............ok
- checking PWRITE..............ok
- checking READ................ok
- checking WRITE...............ok
- checking MKSTEMPS............ok
- checking MKOSTEMPS...........ok
- checking SETRESUID...........ok
- checking SYSCONF.............ok
- checking SPLICE..............ok
- checking TEE.................ok
- checking VMSPLICE............ok
- checking SOCKOPT.............ok
- checking TCP_KEEPIDLE........ok
- checking TCP_KEEPCNT.........ok
- checking TCP_KEEPINTVL.......ok
- checking SO_REUSEPORT........ok
- checking POLL................ok
- checking SYSINFO.............ok
- checking MCHECK..............ok
- checking MOUNT...............ok
- checking UNSHARE.............ok
- checking CHROOT..............ok
- checking SYSLOG..............ok
- checking WAIT4...............ok
-> compiled extunix.0.4.4
-> installed extunix.0.4.4
Processing 88/93: [dokeysto: dune build]
+ /home/opam/.opam/opam-init/hooks/sandbox.sh "build" "dune" "build" "-p" "dokeysto" "-j" "71" (CWD=/home/opam/.opam/5.3-opam/.opam-switch/build/dokeysto.4.0.2)
-> compiled dokeysto.4.0.2
-> installed dokeysto.4.0.2
Processing 90/93: [molenc: dune build]
+ /home/opam/.opam/opam-init/hooks/sandbox.sh "build" "dune" "build" "-p" "molenc" "-j" "71" (CWD=/home/opam/.opam/5.3-opam/.opam-switch/build/molenc.17.0.1)
-> compiled molenc.17.0.1
Processing 91/93: [molenc: cp]
+ /home/opam/.opam/opam-init/hooks/sandbox.sh "install" "cp" "bin/molenc_diam.py" "/home/opam/.opam/5.3-opam/bin/molenc_diam.py" (CWD=/home/opam/.opam/5.3-opam/.opam-switch/build/molenc.17.0.1)
+ /home/opam/.opam/opam-init/hooks/sandbox.sh "install" "cp" "bin/molenc_ph4.py" "/home/opam/.opam/5.3-opam/bin/molenc_ph4.py" (CWD=/home/opam/.opam/5.3-opam/.opam-switch/build/molenc.17.0.1)
+ /home/opam/.opam/opam-init/hooks/sandbox.sh "install" "cp" "bin/molenc.sh" "/home/opam/.opam/5.3-opam/bin/molenc.sh" (CWD=/home/opam/.opam/5.3-opam/.opam-switch/build/molenc.17.0.1)
+ /home/opam/.opam/opam-init/hooks/sandbox.sh "install" "cp" "bin/molenc_ligprep.sh" "/home/opam/.opam/5.3-opam/bin/molenc_ligprep.sh" (CWD=/home/opam/.opam/5.3-opam/.opam-switch/build/molenc.17.0.1)
+ /home/opam/.opam/opam-init/hooks/sandbox.sh "install" "cp" "bin/molenc_common.py" "/home/opam/.opam/5.3-opam/bin/molenc_common.py" (CWD=/home/opam/.opam/5.3-opam/.opam-switch/build/molenc.17.0.1)
+ /home/opam/.opam/opam-init/hooks/sandbox.sh "install" "cp" "bin/molenc_lean.py" "/home/opam/.opam/5.3-opam/bin/molenc_lean.py" (CWD=/home/opam/.opam/5.3-opam/.opam-switch/build/molenc.17.0.1)
+ /home/opam/.opam/opam-init/hooks/sandbox.sh "install" "cp" "bin/molenc_lizard.py" "/home/opam/.opam/5.3-opam/bin/molenc_lizard.py" (CWD=/home/opam/.opam/5.3-opam/.opam-switch/build/molenc.17.0.1)
+ /home/opam/.opam/opam-init/hooks/sandbox.sh "install" "cp" "bin/molenc_scan.py" "/home/opam/.opam/5.3-opam/bin/molenc_scan.py" (CWD=/home/opam/.opam/5.3-opam/.opam-switch/build/molenc.17.0.1)
+ /home/opam/.opam/opam-init/hooks/sandbox.sh "install" "cp" "bin/molenc_scan.sh" "/home/opam/.opam/5.3-opam/bin/molenc_scan.sh" (CWD=/home/opam/.opam/5.3-opam/.opam-switch/build/molenc.17.0.1)
+ /home/opam/.opam/opam-init/hooks/sandbox.sh "install" "cp" "bin/molenc_type_atoms.py" "/home/opam/.opam/5.3-opam/bin/molenc_type_atoms.py" (CWD=/home/opam/.opam/5.3-opam/.opam-switch/build/molenc.17.0.1)
+ /home/opam/.opam/opam-init/hooks/sandbox.sh "install" "cp" "bin/smi2png.py" "/home/opam/.opam/5.3-opam/bin/molenc_smi2png.py" (CWD=/home/opam/.opam/5.3-opam/.opam-switch/build/molenc.17.0.1)
+ /home/opam/.opam/opam-init/hooks/sandbox.sh "install" "cp" "bin/molenc_smisur.py" "/home/opam/.opam/5.3-opam/bin/molenc_smisur.py" (CWD=/home/opam/.opam/5.3-opam/.opam-switch/build/molenc.17.0.1)
+ /home/opam/.opam/opam-init/hooks/sandbox.sh "install" "cp" "bin/molenc_panascan.py" "/home/opam/.opam/5.3-opam/bin/molenc_panascan.py" (CWD=/home/opam/.opam/5.3-opam/.opam-switch/build/molenc.17.0.1)
+ /home/opam/.opam/opam-init/hooks/sandbox.sh "install" "cp" "bin/molenc_scaffold.py" "/home/opam/.opam/5.3-opam/bin/molenc_scaffold.py" (CWD=/home/opam/.opam/5.3-opam/.opam-switch/build/molenc.17.0.1)
+ /home/opam/.opam/opam-init/hooks/sandbox.sh "install" "cp" "bin/molenc_deepsmi.py" "/home/opam/.opam/5.3-opam/bin/molenc_deepsmi.py" (CWD=/home/opam/.opam/5.3-opam/.opam-switch/build/molenc.17.0.1)
+ /home/opam/.opam/opam-init/hooks/sandbox.sh "install" "cp" "bin/molenc_lead.py" "/home/opam/.opam/5.3-opam/bin/molenc_lead.py" (CWD=/home/opam/.opam/5.3-opam/.opam-switch/build/molenc.17.0.1)
+ /home/opam/.opam/opam-init/hooks/sandbox.sh "install" "cp" "bin/molenc_drug.py" "/home/opam/.opam/5.3-opam/bin/molenc_drug.py" (CWD=/home/opam/.opam/5.3-opam/.opam-switch/build/molenc.17.0.1)
+ /home/opam/.opam/opam-init/hooks/sandbox.sh "install" "cp" "bin/molenc_smi2cansmi.py" "/home/opam/.opam/5.3-opam/bin/molenc_smi2cansmi.py" (CWD=/home/opam/.opam/5.3-opam/.opam-switch/build/molenc.17.0.1)
+ /home/opam/.opam/opam-init/hooks/sandbox.sh "install" "cp" "bin/molenc_std.py" "/home/opam/.opam/5.3-opam/bin/molenc_std.py" (CWD=/home/opam/.opam/5.3-opam/.opam-switch/build/molenc.17.0.1)
+ /home/opam/.opam/opam-init/hooks/sandbox.sh "install" "cp" "bin/molenc_padel.py" "/home/opam/.opam/5.3-opam/bin/molenc_padel.py" (CWD=/home/opam/.opam/5.3-opam/.opam-switch/build/molenc.17.0.1)
+ /home/opam/.opam/opam-init/hooks/sandbox.sh "install" "cp" "bin/molenc_rotbond.py" "/home/opam/.opam/5.3-opam/bin/molenc_rotbond.py" (CWD=/home/opam/.opam/5.3-opam/.opam-switch/build/molenc.17.0.1)
+ /home/opam/.opam/opam-init/hooks/sandbox.sh "install" "cp" "bin/molenc_mview.py" "/home/opam/.opam/5.3-opam/bin/molenc_mview.py" (CWD=/home/opam/.opam/5.3-opam/.opam-switch/build/molenc.17.0.1)
+ /home/opam/.opam/opam-init/hooks/sandbox.sh "install" "cp" "bin/molenc_HA.py" "/home/opam/.opam/5.3-opam/bin/molenc_HA.py" (CWD=/home/opam/.opam/5.3-opam/.opam-switch/build/molenc.17.0.1)
+ /home/opam/.opam/opam-init/hooks/sandbox.sh "install" "cp" "bin/molenc_sdf2smi.py" "/home/opam/.opam/5.3-opam/bin/molenc_sdf2smi.py" (CWD=/home/opam/.opam/5.3-opam/.opam-switch/build/molenc.17.0.1)
+ /home/opam/.opam/opam-init/hooks/sandbox.sh "install" "cp" "bin/molenc_atoms_filter.py" "/home/opam/.opam/5.3-opam/bin/molenc_atoms_filter.py" (CWD=/home/opam/.opam/5.3-opam/.opam-switch/build/molenc.17.0.1)
+ /home/opam/.opam/opam-init/hooks/sandbox.sh "install" "cp" "bin/molenc_gpr.py" "/home/opam/.opam/5.3-opam/bin/molenc_gpr.py" (CWD=/home/opam/.opam/5.3-opam/.opam-switch/build/molenc.17.0.1)
+ /home/opam/.opam/opam-init/hooks/sandbox.sh "install" "cp" "bin/molenc_stable.py" "/home/opam/.opam/5.3-opam/bin/molenc_stable.py" (CWD=/home/opam/.opam/5.3-opam/.opam-switch/build/molenc.17.0.1)
+ /home/opam/.opam/opam-init/hooks/sandbox.sh "install" "cp" "bin/molenc_thash.py" "/home/opam/.opam/5.3-opam/bin/molenc_thash.py" (CWD=/home/opam/.opam/5.3-opam/.opam-switch/build/molenc.17.0.1)
+ /home/opam/.opam/opam-init/hooks/sandbox.sh "install" "cp" "bin/molenc_SA.py" "/home/opam/.opam/5.3-opam/bin/molenc_SA.py" (CWD=/home/opam/.opam/5.3-opam/.opam-switch/build/molenc.17.0.1)
+ /home/opam/.opam/opam-init/hooks/sandbox.sh "install" "cp" "bin/fpscores.pkl.gz" "/home/opam/.opam/5.3-opam/bin/fpscores.pkl.gz" (CWD=/home/opam/.opam/5.3-opam/.opam-switch/build/molenc.17.0.1)
-> installed molenc.17.0.1
Processing 92/93: [hts_shrink: dune build]
+ /home/opam/.opam/opam-init/hooks/sandbox.sh "build" "dune" "build" "-p" "hts_shrink" "-j" "71" (CWD=/home/opam/.opam/5.3-opam/.opam-switch/build/hts_shrink.3.0.1)
-> compiled hts_shrink.3.0.1
-> installed hts_shrink.3.0.1
Done.
# To update the current shell environment, run: eval $(opam env)
2026-05-15 09:43.05 ---> saved as "3a4d866e8b7f092e1556f8689e05970e760f87baf1637aa18f8f87f042e09c3d"
Job succeeded
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