OCamllabs icon Home|Differences with the last checks|Previous runs


Building on asteria.caelum.ci.dev

(from ocaml/opam:debian-unstable)
Unable to find image 'ocaml/opam:debian-unstable' locally
debian-unstable: Pulling from ocaml/opam
f6fae32d1855: Pulling fs layer
2b6b54cb75df: Pulling fs layer
7f4f75d80dc4: Pulling fs layer
86f2c2d376f7: Pulling fs layer
5fce5bf93f18: Pulling fs layer
91d6c59c3ffe: Pulling fs layer
9780bb50741d: Pulling fs layer
51f01f04294b: Pulling fs layer
46b42b345cac: Pulling fs layer
91d6c59c3ffe: Waiting
9780bb50741d: Waiting
1dd5551ce92c: Pulling fs layer
55008ed07edc: Pulling fs layer
c1e792eee16f: Pulling fs layer
b2a816a70be2: Pulling fs layer
64b40eba7a69: Pulling fs layer
11491332e35e: Pulling fs layer
3314a0772c11: Pulling fs layer
9ba5ca987e73: Pulling fs layer
a5233de9b1e5: Pulling fs layer
1dd5551ce92c: Waiting
bc6dd62b0adb: Pulling fs layer
55008ed07edc: Waiting
17089b4923c4: Pulling fs layer
5fce5bf93f18: Waiting
51f01f04294b: Waiting
4dc2bdc414fd: Pulling fs layer
64b40eba7a69: Waiting
b2a816a70be2: Waiting
9ba5ca987e73: Waiting
4f4fb700ef54: Pulling fs layer
c1e792eee16f: Waiting
a5233de9b1e5: Waiting
1778f929414c: Pulling fs layer
46b42b345cac: Waiting
21b3034f3560: Pulling fs layer
4dc2bdc414fd: Waiting
3314a0772c11: Waiting
abe40b09cbf3: Pulling fs layer
17089b4923c4: Waiting
1b0f9717b4f3: Pulling fs layer
46bab8457678: Pulling fs layer
1b0f9717b4f3: Waiting
f75badf20e81: Pulling fs layer
92b4348edd65: Pulling fs layer
f8b463772393: Pulling fs layer
f75badf20e81: Waiting
dad7d278149c: Pulling fs layer
f8b463772393: Waiting
0ef56c176f19: Pulling fs layer
3fe17d841d7c: Pulling fs layer
cc682b2328b3: Pulling fs layer
cb04b5db3fe0: Pulling fs layer
46bab8457678: Waiting
7951eb285fe1: Pulling fs layer
3fe17d841d7c: Waiting
cc682b2328b3: Waiting
8eddfc5be3a8: Pulling fs layer
7951eb285fe1: Waiting
cb04b5db3fe0: Waiting
fe0095345d4c: Pulling fs layer
c76cecb20b59: Pulling fs layer
375b1046045f: Pulling fs layer
92c985427cd1: Pulling fs layer
f7d3b985b1ba: Pulling fs layer
375b1046045f: Waiting
7c6e6b052f9d: Pulling fs layer
f7d3b985b1ba: Waiting
e92f54e86812: Pulling fs layer
f8805f233c2e: Pulling fs layer
c76cecb20b59: Waiting
83373b952d2c: Pulling fs layer
663dc85a117d: Pulling fs layer
92c985427cd1: Waiting
f8805f233c2e: Waiting
83373b952d2c: Waiting
7f4f75d80dc4: Verifying Checksum
7f4f75d80dc4: Download complete
2b6b54cb75df: Verifying Checksum
2b6b54cb75df: Download complete
86f2c2d376f7: Verifying Checksum
86f2c2d376f7: Download complete
5fce5bf93f18: Verifying Checksum
5fce5bf93f18: Download complete
9780bb50741d: Verifying Checksum
9780bb50741d: Download complete
51f01f04294b: Verifying Checksum
51f01f04294b: Download complete
46b42b345cac: Verifying Checksum
46b42b345cac: Download complete
f6fae32d1855: Download complete
55008ed07edc: Verifying Checksum
55008ed07edc: Download complete
1dd5551ce92c: Verifying Checksum
1dd5551ce92c: Download complete
c1e792eee16f: Verifying Checksum
c1e792eee16f: Download complete
64b40eba7a69: Verifying Checksum
64b40eba7a69: Download complete
f6fae32d1855: Pull complete
2b6b54cb75df: Pull complete
7f4f75d80dc4: Pull complete
3314a0772c11: Verifying Checksum
3314a0772c11: Download complete
86f2c2d376f7: Pull complete
5fce5bf93f18: Pull complete
9ba5ca987e73: Verifying Checksum
9ba5ca987e73: Download complete
b2a816a70be2: Verifying Checksum
b2a816a70be2: Download complete
a5233de9b1e5: Download complete
bc6dd62b0adb: Verifying Checksum
bc6dd62b0adb: Download complete
17089b4923c4: Verifying Checksum
17089b4923c4: Download complete
4dc2bdc414fd: Verifying Checksum
4dc2bdc414fd: Download complete
4f4fb700ef54: Verifying Checksum
4f4fb700ef54: Download complete
1778f929414c: Verifying Checksum
1778f929414c: Download complete
21b3034f3560: Download complete
abe40b09cbf3: Verifying Checksum
abe40b09cbf3: Download complete
46bab8457678: Download complete
f75badf20e81: Download complete
92b4348edd65: Verifying Checksum
92b4348edd65: Download complete
f8b463772393: Download complete
dad7d278149c: Verifying Checksum
dad7d278149c: Download complete
3fe17d841d7c: Verifying Checksum
3fe17d841d7c: Download complete
0ef56c176f19: Verifying Checksum
0ef56c176f19: Download complete
cc682b2328b3: Verifying Checksum
cc682b2328b3: Download complete
7951eb285fe1: Verifying Checksum
7951eb285fe1: Download complete
8eddfc5be3a8: Verifying Checksum
8eddfc5be3a8: Download complete
fe0095345d4c: Download complete
91d6c59c3ffe: Verifying Checksum
91d6c59c3ffe: Download complete
375b1046045f: Verifying Checksum
375b1046045f: Download complete
c76cecb20b59: Verifying Checksum
c76cecb20b59: Download complete
92c985427cd1: Verifying Checksum
92c985427cd1: Download complete
7c6e6b052f9d: Verifying Checksum
7c6e6b052f9d: Download complete
cb04b5db3fe0: Download complete
f8805f233c2e: Verifying Checksum
f8805f233c2e: Download complete
83373b952d2c: Verifying Checksum
83373b952d2c: Download complete
663dc85a117d: Download complete
f7d3b985b1ba: Verifying Checksum
f7d3b985b1ba: Download complete
e92f54e86812: Verifying Checksum
e92f54e86812: Download complete
91d6c59c3ffe: Pull complete
9780bb50741d: Pull complete
51f01f04294b: Pull complete
46b42b345cac: Pull complete
1dd5551ce92c: Pull complete
55008ed07edc: Pull complete
c1e792eee16f: Pull complete
b2a816a70be2: Pull complete
64b40eba7a69: Pull complete
11491332e35e: Pull complete
3314a0772c11: Pull complete
9ba5ca987e73: Pull complete
a5233de9b1e5: Pull complete
bc6dd62b0adb: Pull complete
17089b4923c4: Pull complete
4dc2bdc414fd: Pull complete
4f4fb700ef54: Pull complete
1778f929414c: Pull complete
21b3034f3560: Pull complete
abe40b09cbf3: Pull complete
1b0f9717b4f3: Pull complete
46bab8457678: Pull complete
f75badf20e81: Pull complete
92b4348edd65: Pull complete
f8b463772393: Pull complete
dad7d278149c: Pull complete
0ef56c176f19: Pull complete
3fe17d841d7c: Pull complete
cc682b2328b3: Pull complete
cb04b5db3fe0: Pull complete
7951eb285fe1: Pull complete
8eddfc5be3a8: Pull complete
fe0095345d4c: Pull complete
c76cecb20b59: Pull complete
375b1046045f: Pull complete
92c985427cd1: Pull complete
f7d3b985b1ba: Pull complete
7c6e6b052f9d: Pull complete
e92f54e86812: Pull complete
f8805f233c2e: Pull complete
83373b952d2c: Pull complete
663dc85a117d: Pull complete
Digest: sha256:215d78cea03ed28969926c5e696b68d631be333be3e2b3e86a048d1da602d241
Status: Downloaded newer image for ocaml/opam:debian-unstable
2025-08-11 14:54.38 ---> using "0acd5aeaa8f7bc314514d9795d14a7f12ec72a6a5b11c5904350189734c6859b" from cache

/: (user (uid 1000) (gid 1000))

/: (env OPAMPRECISETRACKING 1)

/: (env OPAMUTF8 never)

/: (env OPAMEXTERNALSOLVER builtin-0install)

/: (env OPAMCRITERIA +removed)

/: (env CI true)

/: (env OPAM_HEALTH_CHECK_CI true)

/: (run (shell "sudo ln -f /usr/bin/opam-dev /usr/bin/opam"))
2025-08-11 14:54.38 ---> using "40df4fa4cdfc68a5fa7a326047e82a7adc5df52b8059d4a7b745bdd50aad56e7" from cache

/: (run (network host)
        (shell "rm -rf ~/opam-repository && git clone -q 'https://github.com/ocaml/opam-repository' ~/opam-repository && git -C ~/opam-repository checkout -q 854fc71d55ce63c2ce04935106fe0551861f9a39"))
2025-08-11 14:54.38 ---> using "475916120a5e8bdd46d5bf720fb18956c4e33cacc85007945b14f932636914ee" from cache

/: (run (shell "rm -rf ~/.opam && opam init -ya --bare --config ~/.opamrc-sandbox ~/opam-repository"))
Configuring from /home/opam/.opamrc-sandbox, then /home/opam/.opamrc, and finally from built-in defaults.
Checking for available remotes: rsync and local, git.
  - you won't be able to use mercurial repositories unless you install the hg command on your system.
  - you won't be able to use darcs repositories unless you install the darcs command on your system.


<><> Fetching repository information ><><><><><><><><><><><><><><><><><><><><><>
[default] Initialised

User configuration:
  ~/.profile is already up-to-date.
[NOTE] Make sure that ~/.profile is well sourced in your ~/.bashrc.

2025-08-11 14:54.38 ---> using "9be99d11144cc1a35d40ac27ad0f9322c1e9cd078064bb7137a66028612eb814" from cache

/: (run (cache (opam-archives (target /home/opam/.opam/download-cache)) (opam-dune-cache (target /home/opam/.cache/dune)))
        (network host)
        (shell "opam switch create --repositories=default '5.3-opam' '5.3.0'"))

<><> Installing new switch packages <><><><><><><><><><><><><><><><><><><><><><>
Switch invariant: ["ocaml-base-compiler" {= "5.3.0"}]

<><> Processing actions <><><><><><><><><><><><><><><><><><><><><><><><><><><><>
-> retrieved ocaml-config.3  (cached)
-> installed base-bigarray.base
-> installed base-threads.base
-> installed base-unix.base
-> installed ocaml-options-vanilla.1
-> retrieved ocaml-compiler.5.3.0  (cached)
-> installed ocaml-compiler.5.3.0
-> installed ocaml-base-compiler.5.3.0
-> installed ocaml-config.3
-> installed ocaml.5.3.0
-> installed base-domains.base
-> installed base-effects.base
-> installed base-nnp.base
Done.
# To update the current shell environment, run: eval $(opam env --switch=5.3-opam)
2025-08-11 14:54.38 ---> using "b9fcdb3ea6c521a476456b374999641423e11455d71ed9962c683d63e24f241d" from cache

/: (run (network host)
        (shell "opam update --depexts"))
+ /usr/bin/sudo "apt-get" "update"
- Get:1 http://deb.debian.org/debian unstable InRelease [216 kB]
- Get:2 http://deb.debian.org/debian unstable/main amd64 Packages.diff/Index [63.6 kB]
- Get:3 http://deb.debian.org/debian unstable/main amd64 Packages T-2025-08-11-0818.03-F-2025-08-09-1855.42.pdiff [283 kB]
- Get:3 http://deb.debian.org/debian unstable/main amd64 Packages T-2025-08-11-0818.03-F-2025-08-09-1855.42.pdiff [283 kB]
- Fetched 562 kB in 1s (391 kB/s)
- Reading package lists...
- 
2025-08-11 14:54.38 ---> using "ae9398ef5a2cbea98741e4c1fc188ccf6f9cbafdc909f5d707d3bf1a05297c76" from cache

/: (run (cache (opam-archives (target /home/opam/.opam/download-cache)) (opam-dune-cache (target /home/opam/.cache/dune)))
        (network host)
        (shell "opam pin add -k version dune $(opam show -f version dune)"))
dune is now pinned to version 3.19.1

The following actions will be performed:
=== install 1 package
  - install dune 3.19.1 (pinned)

<><> Processing actions <><><><><><><><><><><><><><><><><><><><><><><><><><><><>
-> retrieved dune.3.19.1  (cached)
-> installed dune.3.19.1
Done.
# To update the current shell environment, run: eval $(opam env)
2025-08-11 14:54.38 ---> using "d61dddc75f3540a1266573579489b25149345e987938e9ad2c4ab34791d06a66" from cache

/: (env DUNE_CACHE enabled)

/: (env DUNE_CACHE_TRANSPORT direct)

/: (env DUNE_CACHE_DUPLICATION copy)

/: (run (cache (opam-archives (target /home/opam/.opam/download-cache)) (opam-dune-cache (target /home/opam/.cache/dune)))
        (network host)
        (shell  "opam remove -y fasmifra.2.1.0\
               \nopam install -vy fasmifra.2.1.0\
               \nres=$?\
               \nif [ $res = 31 ]; then\
               \n    if opam show -f x-ci-accept-failures: fasmifra.2.1.0 | grep -q 'debian-unstable'; then\
               \n        echo \"This package failed and has been disabled for CI using the 'x-ci-accept-failures' field.\"\
               \n        exit 69\
               \n    fi\
               \nfi \
               \n\
               \n\
               \nexit $res"))
Nothing to do.
[NOTE] fasmifra.2.1.0 is not installed.

The following actions will be performed:
=== install 10 packages
  - install batteries     3.9.0 [required by fasmifra]
  - install camlp-streams 5.0.1 [required by batteries]
  - install conf-python-3 9.0.0 [required by fasmifra]
  - install conf-rdkit    1     [required by fasmifra]
  - install dolog         6.0.0 [required by fasmifra]
  - install fasmifra      2.1.0
  - install line_oriented 1.3.0 [required by fasmifra]
  - install minicli       5.0.2 [required by fasmifra]
  - install num           1.6   [required by batteries]
  - install ocamlfind     1.9.8 [required by batteries]

The following system packages will first need to be installed:
    librdkit-dev python3 python3-rdkit

<><> Handling external dependencies <><><><><><><><><><><><><><><><><><><><><><>

opam believes some required external dependencies are missing. opam can:
> 1. Run apt-get to install them (may need root/sudo access)
  2. Display the recommended apt-get command and wait while you run it manually (e.g. in another terminal)
  3. Continue anyway, and, upon success, permanently register that this external dependency is present, but not detectable
  4. Abort the installation

[1/2/3/4] 1

+ /usr/bin/sudo "apt-get" "install" "-qq" "-yy" "librdkit-dev" "python3" "python3-rdkit"
- Preconfiguring packages ...
- Selecting previously unselected package libpython3.13-minimal:amd64.
- (Reading database ... 
- (Reading database ... 5%
(Reading database ... 10%
(Reading database ... 15%
(Reading database ... 20%
(Reading database ... 25%
(Reading database ... 30%
(Reading database ... 35%
(Reading database ... 40%
(Reading database ... 45%
(Reading database ... 50%
(Reading database ... 55%
(Reading database ... 60%
(Reading database ... 65%
(Reading database ... 70%
(Reading database ... 75%
(Reading database ... 80%
(Reading database ... 85%
(Reading database ... 90%
(Reading database ... 95%
(Reading database ... 100%
(Reading database ... 20685 files and directories currently installed.)
- Preparing to unpack .../libpython3.13-minimal_3.13.6-1_amd64.deb ...
- Unpacking libpython3.13-minimal:amd64 (3.13.6-1) ...
- Selecting previously unselected package python3.13-minimal.
- Preparing to unpack .../python3.13-minimal_3.13.6-1_amd64.deb ...
- Unpacking python3.13-minimal (3.13.6-1) ...
- Setting up libpython3.13-minimal:amd64 (3.13.6-1) ...
- Setting up python3.13-minimal (3.13.6-1) ...
- Selecting previously unselected package python3-minimal.
- (Reading database ... 
(Reading database ... 5%
(Reading database ... 10%
(Reading database ... 15%
(Reading database ... 20%
(Reading database ... 25%
(Reading database ... 30%
(Reading database ... 35%
(Reading database ... 40%
(Reading database ... 45%
(Reading database ... 50%
(Reading database ... 55%
(Reading database ... 60%
(Reading database ... 65%
(Reading database ... 70%
(Reading database ... 75%
(Reading database ... 80%
(Reading database ... 85%
(Reading database ... 90%
(Reading database ... 95%
(Reading database ... 100%
(Reading database ... 21010 files and directories currently installed.)
- Preparing to unpack .../0-python3-minimal_3.13.5-1_amd64.deb ...
- Unpacking python3-minimal (3.13.5-1) ...
- Selecting previously unselected package media-types.
- Preparing to unpack .../1-media-types_13.0.0_all.deb ...
- Unpacking media-types (13.0.0) ...
- Selecting previously unselected package readline-common.
- Preparing to unpack .../2-readline-common_8.2-6_all.deb ...
- Unpacking readline-common (8.2-6) ...
- Selecting previously unselected package libreadline8t64:amd64.
- Preparing to unpack .../3-libreadline8t64_8.2-6_amd64.deb ...
- Adding 'diversion of /lib/x86_64-linux-gnu/libhistory.so.8 to /lib/x86_64-linux-gnu/libhistory.so.8.usr-is-merged by libreadline8t64'
- Adding 'diversion of /lib/x86_64-linux-gnu/libhistory.so.8.2 to /lib/x86_64-linux-gnu/libhistory.so.8.2.usr-is-merged by libreadline8t64'
- Adding 'diversion of /lib/x86_64-linux-gnu/libreadline.so.8 to /lib/x86_64-linux-gnu/libreadline.so.8.usr-is-merged by libreadline8t64'
- Adding 'diversion of /lib/x86_64-linux-gnu/libreadline.so.8.2 to /lib/x86_64-linux-gnu/libreadline.so.8.2.usr-is-merged by libreadline8t64'
- Unpacking libreadline8t64:amd64 (8.2-6) ...
- Selecting previously unselected package libpython3.13-stdlib:amd64.
- Preparing to unpack .../4-libpython3.13-stdlib_3.13.6-1_amd64.deb ...
- Unpacking libpython3.13-stdlib:amd64 (3.13.6-1) ...
- Selecting previously unselected package python3.13.
- Preparing to unpack .../5-python3.13_3.13.6-1_amd64.deb ...
- Unpacking python3.13 (3.13.6-1) ...
- Selecting previously unselected package libpython3-stdlib:amd64.
- Preparing to unpack .../6-libpython3-stdlib_3.13.5-1_amd64.deb ...
- Unpacking libpython3-stdlib:amd64 (3.13.5-1) ...
- Setting up python3-minimal (3.13.5-1) ...
- Selecting previously unselected package python3.
- (Reading database ... 
(Reading database ... 5%
(Reading database ... 10%
(Reading database ... 15%
(Reading database ... 20%
(Reading database ... 25%
(Reading database ... 30%
(Reading database ... 35%
(Reading database ... 40%
(Reading database ... 45%
(Reading database ... 50%
(Reading database ... 55%
(Reading database ... 60%
(Reading database ... 65%
(Reading database ... 70%
(Reading database ... 75%
(Reading database ... 80%
(Reading database ... 85%
(Reading database ... 90%
(Reading database ... 95%
(Reading database ... 100%
(Reading database ... 21496 files and directories currently installed.)
- Preparing to unpack .../python3_3.13.5-1_amd64.deb ...
- Unpacking python3 (3.13.5-1) ...
- Selecting previously unselected package python3-numpy-dev:amd64.
- Preparing to unpack .../python3-numpy-dev_1%3a2.2.4+ds-1_amd64.deb ...
- Unpacking python3-numpy-dev:amd64 (1:2.2.4+ds-1) ...
- Selecting previously unselected package gcc-15-base:amd64.
- Preparing to unpack .../gcc-15-base_15.2.0-1_amd64.deb ...
- Unpacking gcc-15-base:amd64 (15.2.0-1) ...
- Setting up gcc-15-base:amd64 (15.2.0-1) ...
- (Reading database ... 
(Reading database ... 5%
(Reading database ... 10%
(Reading database ... 15%
(Reading database ... 20%
(Reading database ... 25%
(Reading database ... 30%
(Reading database ... 35%
(Reading database ... 40%
(Reading database ... 45%
(Reading database ... 50%
(Reading database ... 55%
(Reading database ... 60%
(Reading database ... 65%
(Reading database ... 70%
(Reading database ... 75%
(Reading database ... 80%
(Reading database ... 85%
(Reading database ... 90%
(Reading database ... 95%
(Reading database ... 100%
(Reading database ... 21581 files and directories currently installed.)
- Preparing to unpack .../libgcc-s1_15.2.0-1_amd64.deb ...
- Unpacking libgcc-s1:amd64 (15.2.0-1) over (14.2.0-19) ...
- Setting up libgcc-s1:amd64 (15.2.0-1) ...
- Selecting previously unselected package libblas3:amd64.
- (Reading database ... 
(Reading database ... 5%
(Reading database ... 10%
(Reading database ... 15%
(Reading database ... 20%
(Reading database ... 25%
(Reading database ... 30%
(Reading database ... 35%
(Reading database ... 40%
(Reading database ... 45%
(Reading database ... 50%
(Reading database ... 55%
(Reading database ... 60%
(Reading database ... 65%
(Reading database ... 70%
(Reading database ... 75%
(Reading database ... 80%
(Reading database ... 85%
(Reading database ... 90%
(Reading database ... 95%
(Reading database ... 100%
(Reading database ... 21581 files and directories currently installed.)
- Preparing to unpack .../libblas3_3.12.1-6_amd64.deb ...
- Unpacking libblas3:amd64 (3.12.1-6) ...
- Selecting previously unselected package libgfortran5:amd64.
- Preparing to unpack .../libgfortran5_15.2.0-1_amd64.deb ...
- Unpacking libgfortran5:amd64 (15.2.0-1) ...
- Selecting previously unselected package liblapack3:amd64.
- Preparing to unpack .../liblapack3_3.12.1-6_amd64.deb ...
- Unpacking liblapack3:amd64 (3.12.1-6) ...
- Preparing to unpack .../libstdc++6_15.2.0-1_amd64.deb ...
- Unpacking libstdc++6:amd64 (15.2.0-1) over (14.2.0-19) ...
- Setting up libstdc++6:amd64 (15.2.0-1) ...
- Selecting previously unselected package python3-numpy.
- (Reading database ... 
(Reading database ... 5%
(Reading database ... 10%
(Reading database ... 15%
(Reading database ... 20%
(Reading database ... 25%
(Reading database ... 30%
(Reading database ... 35%
(Reading database ... 40%
(Reading database ... 45%
(Reading database ... 50%
(Reading database ... 55%
(Reading database ... 60%
(Reading database ... 65%
(Reading database ... 70%
(Reading database ... 75%
(Reading database ... 80%
(Reading database ... 85%
(Reading database ... 90%
(Reading database ... 95%
(Reading database ... 100%
(Reading database ... 21598 files and directories currently installed.)
- Preparing to unpack .../00-python3-numpy_1%3a2.2.4+ds-1_amd64.deb ...
- Unpacking python3-numpy (1:2.2.4+ds-1) ...
- Selecting previously unselected package fonts-dejavu-mono.
- Preparing to unpack .../01-fonts-dejavu-mono_2.37-8_all.deb ...
- Unpacking fonts-dejavu-mono (2.37-8) ...
- Selecting previously unselected package fonts-dejavu-core.
- Preparing to unpack .../02-fonts-dejavu-core_2.37-8_all.deb ...
- Unpacking fonts-dejavu-core (2.37-8) ...
- Selecting previously unselected package fonts-freefont-ttf.
- Preparing to unpack .../03-fonts-freefont-ttf_20211204+svn4273-2_all.deb ...
- Unpacking fonts-freefont-ttf (20211204+svn4273-2) ...
- Selecting previously unselected package fontconfig-config.
- Preparing to unpack .../04-fontconfig-config_2.15.0-2.3_amd64.deb ...
- Unpacking fontconfig-config (2.15.0-2.3) ...
- Preparing to unpack .../05-libasan8_15.2.0-1_amd64.deb ...
- Unpacking libasan8:amd64 (15.2.0-1) over (14.2.0-19) ...
- Preparing to unpack .../06-libatomic1_15.2.0-1_amd64.deb ...
- Unpacking libatomic1:amd64 (15.2.0-1) over (14.2.0-19) ...
- Selecting previously unselected package libboost-iostreams1.83.0:amd64.
- Preparing to unpack .../07-libboost-iostreams1.83.0_1.83.0-4.2_amd64.deb ...
- Unpacking libboost-iostreams1.83.0:amd64 (1.83.0-4.2) ...
- Selecting previously unselected package libboost-python1.83.0.
- Preparing to unpack .../08-libboost-python1.83.0_1.83.0-4.2_amd64.deb ...
- Unpacking libboost-python1.83.0 (1.83.0-4.2) ...
- Selecting previously unselected package libboost-numpy1.83.0.
- Preparing to unpack .../09-libboost-numpy1.83.0_1.83.0-4.2_amd64.deb ...
- Unpacking libboost-numpy1.83.0 (1.83.0-4.2) ...
- Selecting previously unselected package libboost-serialization1.83.0:amd64.
- Preparing to unpack .../10-libboost-serialization1.83.0_1.83.0-4.2_amd64.deb ...
- Unpacking libboost-serialization1.83.0:amd64 (1.83.0-4.2) ...
- Selecting previously unselected package libpng16-16t64:amd64.
- Preparing to unpack .../11-libpng16-16t64_1.6.50-1_amd64.deb ...
- Unpacking libpng16-16t64:amd64 (1.6.50-1) ...
- Selecting previously unselected package libfreetype6:amd64.
- Preparing to unpack .../12-libfreetype6_2.13.3+dfsg-1_amd64.deb ...
- Unpacking libfreetype6:amd64 (2.13.3+dfsg-1) ...
- Selecting previously unselected package libfontconfig1:amd64.
- Preparing to unpack .../13-libfontconfig1_2.15.0-2.3_amd64.deb ...
- Unpacking libfontconfig1:amd64 (2.15.0-2.3) ...
- Selecting previously unselected package libpixman-1-0:amd64.
- Preparing to unpack .../14-libpixman-1-0_0.44.0-3_amd64.deb ...
- Unpacking libpixman-1-0:amd64 (0.44.0-3) ...
- Selecting previously unselected package libxcb-render0:amd64.
- Preparing to unpack .../15-libxcb-render0_1.17.0-2+b1_amd64.deb ...
- Unpacking libxcb-render0:amd64 (1.17.0-2+b1) ...
- Selecting previously unselected package libxcb-shm0:amd64.
- Preparing to unpack .../16-libxcb-shm0_1.17.0-2+b1_amd64.deb ...
- Unpacking libxcb-shm0:amd64 (1.17.0-2+b1) ...
- Selecting previously unselected package libxrender1:amd64.
- Preparing to unpack .../17-libxrender1_1%3a0.9.12-1_amd64.deb ...
- Unpacking libxrender1:amd64 (1:0.9.12-1) ...
- Selecting previously unselected package libcairo2:amd64.
- Preparing to unpack .../18-libcairo2_1.18.4-1+b1_amd64.deb ...
- Unpacking libcairo2:amd64 (1.18.4-1+b1) ...
- Preparing to unpack .../19-libcc1-0_15.2.0-1_amd64.deb ...
- Unpacking libcc1-0:amd64 (15.2.0-1) over (14.2.0-19) ...
- Selecting previously unselected package libcoordgen3:amd64.
- Preparing to unpack .../20-libcoordgen3_3.0.2-1+b2_amd64.deb ...
- Unpacking libcoordgen3:amd64 (3.0.2-1+b2) ...
- Preparing to unpack .../21-libgomp1_15.2.0-1_amd64.deb ...
- Unpacking libgomp1:amd64 (15.2.0-1) over (14.2.0-19) ...
- Preparing to unpack .../22-libhwasan0_15.2.0-1_amd64.deb ...
- Unpacking libhwasan0:amd64 (15.2.0-1) over (14.2.0-19) ...
- Selecting previously unselected package libinchi1.07.
- Preparing to unpack .../23-libinchi1.07_1.07.3+dfsg-1_amd64.deb ...
- Unpacking libinchi1.07 (1.07.3+dfsg-1) ...
- Preparing to unpack .../24-libitm1_15.2.0-1_amd64.deb ...
- Unpacking libitm1:amd64 (15.2.0-1) over (14.2.0-19) ...
- Preparing to unpack .../25-liblsan0_15.2.0-1_amd64.deb ...
- Unpacking liblsan0:amd64 (15.2.0-1) over (14.2.0-19) ...
- Selecting previously unselected package libmaeparser1:amd64.
- Preparing to unpack .../26-libmaeparser1_1.3.1-1+b2_amd64.deb ...
- Unpacking libmaeparser1:amd64 (1.3.1-1+b2) ...
- Preparing to unpack .../27-libquadmath0_15.2.0-1_amd64.deb ...
- Unpacking libquadmath0:amd64 (15.2.0-1) over (14.2.0-19) ...
- Selecting previously unselected package librdkit1t64.
- Preparing to unpack .../28-librdkit1t64_202503.1-4_amd64.deb ...
- Unpacking librdkit1t64 (202503.1-4) ...
- Selecting previously unselected package librdkit-dev.
- Preparing to unpack .../29-librdkit-dev_202503.1-4_amd64.deb ...
- Unpacking librdkit-dev (202503.1-4) ...
- Preparing to unpack .../30-libtsan2_15.2.0-1_amd64.deb ...
- Unpacking libtsan2:amd64 (15.2.0-1) over (14.2.0-19) ...
- Preparing to unpack .../31-libubsan1_15.2.0-1_amd64.deb ...
- Unpacking libubsan1:amd64 (15.2.0-1) over (14.2.0-19) ...
- Selecting previously unselected package rdkit-data.
- Preparing to unpack .../32-rdkit-data_202503.1-4_all.deb ...
- Unpacking rdkit-data (202503.1-4) ...
- Selecting previously unselected package python3-rdkit.
- Preparing to unpack .../33-python3-rdkit_202503.1-4_amd64.deb ...
- Unpacking python3-rdkit (202503.1-4) ...
- Setting up media-types (13.0.0) ...
- Setting up libboost-python1.83.0 (1.83.0-4.2) ...
- Setting up libpixman-1-0:amd64 (0.44.0-3) ...
- Setting up libxrender1:amd64 (1:0.9.12-1) ...
- Setting up libxcb-render0:amd64 (1.17.0-2+b1) ...
- Setting up fonts-freefont-ttf (20211204+svn4273-2) ...
- Setting up libxcb-shm0:amd64 (1.17.0-2+b1) ...
- Setting up libgomp1:amd64 (15.2.0-1) ...
- Setting up rdkit-data (202503.1-4) ...
- Setting up libboost-serialization1.83.0:amd64 (1.83.0-4.2) ...
- Setting up libboost-numpy1.83.0 (1.83.0-4.2) ...
- Setting up libblas3:amd64 (3.12.1-6) ...
- update-alternatives: using /usr/lib/x86_64-linux-gnu/blas/libblas.so.3 to provide /usr/lib/x86_64-linux-gnu/libblas.so.3 (libblas.so.3-x86_64-linux-gnu) in auto mode
- Setting up libboost-iostreams1.83.0:amd64 (1.83.0-4.2) ...
- Setting up libquadmath0:amd64 (15.2.0-1) ...
- Setting up fonts-dejavu-mono (2.37-8) ...
- Setting up libpng16-16t64:amd64 (1.6.50-1) ...
- Setting up python3-numpy-dev:amd64 (1:2.2.4+ds-1) ...
- Setting up libatomic1:amd64 (15.2.0-1) ...
- Setting up fonts-dejavu-core (2.37-8) ...
- Setting up libgfortran5:amd64 (15.2.0-1) ...
- Setting up libubsan1:amd64 (15.2.0-1) ...
- Setting up libhwasan0:amd64 (15.2.0-1) ...
- Setting up libasan8:amd64 (15.2.0-1) ...
- Setting up libtsan2:amd64 (15.2.0-1) ...
- Setting up libcoordgen3:amd64 (3.0.2-1+b2) ...
- Setting up libinchi1.07 (1.07.3+dfsg-1) ...
- Setting up readline-common (8.2-6) ...
- Setting up libcc1-0:amd64 (15.2.0-1) ...
- Setting up liblsan0:amd64 (15.2.0-1) ...
- Setting up libitm1:amd64 (15.2.0-1) ...
- Setting up liblapack3:amd64 (3.12.1-6) ...
- update-alternatives: using /usr/lib/x86_64-linux-gnu/lapack/liblapack.so.3 to provide /usr/lib/x86_64-linux-gnu/liblapack.so.3 (liblapack.so.3-x86_64-linux-gnu) in auto mode
- Setting up fontconfig-config (2.15.0-2.3) ...
- Setting up libmaeparser1:amd64 (1.3.1-1+b2) ...
- Setting up libfreetype6:amd64 (2.13.3+dfsg-1) ...
- Setting up libreadline8t64:amd64 (8.2-6) ...
- Setting up libfontconfig1:amd64 (2.15.0-2.3) ...
- Setting up libpython3.13-stdlib:amd64 (3.13.6-1) ...
- Setting up libpython3-stdlib:amd64 (3.13.5-1) ...
- Setting up python3.13 (3.13.6-1) ...
- Setting up python3 (3.13.5-1) ...
- running python rtupdate hooks for python3.13...
- running python post-rtupdate hooks for python3.13...
- Setting up libcairo2:amd64 (1.18.4-1+b1) ...
- Setting up python3-numpy (1:2.2.4+ds-1) ...
- Setting up librdkit1t64 (202503.1-4) ...
- Setting up python3-rdkit (202503.1-4) ...
- Setting up librdkit-dev (202503.1-4) ...
- Processing triggers for libc-bin (2.41-12) ...

<><> Processing actions <><><><><><><><><><><><><><><><><><><><><><><><><><><><>
Processing  1/30: [batteries.3.9.0: extract]
Processing  2/30: [batteries.3.9.0: extract] [camlp-streams.5.0.1: extract]
-> retrieved conf-python-3.9.0.0  (cached)
Processing  3/30: [batteries.3.9.0: extract] [camlp-streams.5.0.1: extract]
-> retrieved conf-rdkit.1  (cached)
Processing  4/30: [batteries.3.9.0: extract] [camlp-streams.5.0.1: extract]
Processing  5/30: [batteries.3.9.0: extract] [camlp-streams.5.0.1: extract] [dolog.6.0.0: extract]
Processing  6/30: [batteries.3.9.0: extract] [camlp-streams.5.0.1: extract] [dolog.6.0.0: extract] [conf-python-3: python3 test.py]
Processing  7/30: [batteries.3.9.0: extract] [camlp-streams.5.0.1: extract] [dolog.6.0.0: extract] [conf-python-3: python3 test.py] [conf-rdkit: sh]
-> retrieved batteries.3.9.0  (cached)
Processing  7/30: [camlp-streams.5.0.1: extract] [dolog.6.0.0: extract] [conf-python-3: python3 test.py] [conf-rdkit: sh]
Processing  8/30: [camlp-streams.5.0.1: extract] [dolog.6.0.0: extract] [fasmifra.2.1.0: extract] [conf-python-3: python3 test.py] [conf-rdkit: sh]
-> retrieved camlp-streams.5.0.1  (cached)
Processing  8/30: [dolog.6.0.0: extract] [fasmifra.2.1.0: extract] [conf-python-3: python3 test.py] [conf-rdkit: sh]
Processing  9/30: [dolog.6.0.0: extract] [fasmifra.2.1.0: extract] [line_oriented.1.3.0: extract] [conf-python-3: python3 test.py] [conf-rdkit: sh]
Processing 10/30: [dolog.6.0.0: extract] [fasmifra.2.1.0: extract] [line_oriented.1.3.0: extract] [camlp-streams: dune build] [conf-python-3: python3 test.py] [conf-rdkit: sh]
-> retrieved dolog.6.0.0  (cached)
Processing 10/30: [fasmifra.2.1.0: extract] [line_oriented.1.3.0: extract] [camlp-streams: dune build] [conf-python-3: python3 test.py] [conf-rdkit: sh]
Processing 11/30: [fasmifra.2.1.0: extract] [line_oriented.1.3.0: extract] [minicli.5.0.2: extract] [camlp-streams: dune build] [conf-python-3: python3 test.py] [conf-rdkit: sh]
Processing 12/30: [fasmifra.2.1.0: extract] [line_oriented.1.3.0: extract] [minicli.5.0.2: extract] [camlp-streams: dune build] [conf-python-3: python3 test.py] [conf-rdkit: sh] [dolog: dune build]
+ /home/opam/.opam/opam-init/hooks/sandbox.sh "build" "python3" "test.py" (CWD=/home/opam/.opam/5.3-opam/.opam-switch/build/conf-python-3.9.0.0)
- python-3 OK
-> compiled  conf-python-3.9.0.0
Processing 12/30: [fasmifra.2.1.0: extract] [line_oriented.1.3.0: extract] [minicli.5.0.2: extract] [camlp-streams: dune build] [conf-rdkit: sh] [dolog: dune build]
-> installed conf-python-3.9.0.0
Processing 13/30: [fasmifra.2.1.0: extract] [line_oriented.1.3.0: extract] [minicli.5.0.2: extract] [camlp-streams: dune build] [conf-rdkit: sh] [dolog: dune build]
+ /home/opam/.opam/opam-init/hooks/sandbox.sh "build" "sh" "-c" "c++ test.cpp -o test -I/usr/include/rdkit -lRDKitRDGeneral -DSWIG || c++ test.cpp -o test -I/usr/include/rdkit -lRDGeneral -DSWIG" (CWD=/home/opam/.opam/5.3-opam/.opam-switch/build/conf-rdkit.1)
Processing 13/30: [fasmifra.2.1.0: extract] [line_oriented.1.3.0: extract] [minicli.5.0.2: extract] [camlp-streams: dune build] [conf-rdkit: ./test] [dolog: dune build]
-> retrieved line_oriented.1.3.0  (cached)
Processing 13/30: [fasmifra.2.1.0: extract] [minicli.5.0.2: extract] [camlp-streams: dune build] [conf-rdkit: ./test] [dolog: dune build]
Processing 14/30: [fasmifra.2.1.0: extract] [minicli.5.0.2: extract] [num.1.6: extract] [camlp-streams: dune build] [conf-rdkit: ./test] [dolog: dune build]
-> retrieved minicli.5.0.2  (cached)
Processing 14/30: [fasmifra.2.1.0: extract] [num.1.6: extract] [camlp-streams: dune build] [conf-rdkit: ./test] [dolog: dune build]
Processing 15/30: [fasmifra.2.1.0: extract] [num.1.6: extract] [ocamlfind.1.9.8: extract] [camlp-streams: dune build] [conf-rdkit: ./test] [dolog: dune build]
Processing 16/30: [fasmifra.2.1.0: extract] [num.1.6: extract] [ocamlfind.1.9.8: extract] [camlp-streams: dune build] [conf-rdkit: ./test] [dolog: dune build] [minicli: dune build]
-> retrieved fasmifra.2.1.0  (cached)
Processing 16/30: [num.1.6: extract] [ocamlfind.1.9.8: extract] [camlp-streams: dune build] [conf-rdkit: ./test] [dolog: dune build] [minicli: dune build]
-> retrieved num.1.6  (cached)
Processing 16/30: [ocamlfind.1.9.8: extract] [camlp-streams: dune build] [conf-rdkit: ./test] [dolog: dune build] [minicli: dune build]
Processing 17/30: [ocamlfind.1.9.8: extract] [camlp-streams: dune build] [conf-rdkit: ./test] [dolog: dune build] [minicli: dune build] [num: make opam-modern]
-> retrieved ocamlfind.1.9.8  (cached)
Processing 17/30: [camlp-streams: dune build] [conf-rdkit: ./test] [dolog: dune build] [minicli: dune build] [num: make opam-modern]
Processing 18/30: [camlp-streams: dune build] [conf-rdkit: ./test] [dolog: dune build] [minicli: dune build] [num: make opam-modern] [ocamlfind: ./configure]
+ /home/opam/.opam/opam-init/hooks/sandbox.sh "build" "./test" (CWD=/home/opam/.opam/5.3-opam/.opam-switch/build/conf-rdkit.1)
- 2025.03.1
-> compiled  conf-rdkit.1
Processing 18/30: [camlp-streams: dune build] [dolog: dune build] [minicli: dune build] [num: make opam-modern] [ocamlfind: ./configure]
-> installed conf-rdkit.1
Processing 19/30: [camlp-streams: dune build] [dolog: dune build] [minicli: dune build] [num: make opam-modern] [ocamlfind: ./configure]
+ /home/opam/.opam/opam-init/hooks/sandbox.sh "build" "dune" "build" "-p" "dolog" "-j" "255" (CWD=/home/opam/.opam/5.3-opam/.opam-switch/build/dolog.6.0.0)
-> compiled  dolog.6.0.0
Processing 19/30: [camlp-streams: dune build] [minicli: dune build] [num: make opam-modern] [ocamlfind: ./configure]
-> installed dolog.6.0.0
Processing 20/30: [camlp-streams: dune build] [minicli: dune build] [num: make opam-modern] [ocamlfind: ./configure]
+ /home/opam/.opam/opam-init/hooks/sandbox.sh "build" "dune" "build" "-p" "minicli" "-j" "255" (CWD=/home/opam/.opam/5.3-opam/.opam-switch/build/minicli.5.0.2)
-> compiled  minicli.5.0.2
Processing 20/30: [camlp-streams: dune build] [num: make opam-modern] [ocamlfind: ./configure]
-> installed minicli.5.0.2
Processing 21/30: [camlp-streams: dune build] [num: make opam-modern] [ocamlfind: ./configure]
+ /home/opam/.opam/opam-init/hooks/sandbox.sh "build" "dune" "build" "-p" "camlp-streams" "-j" "255" "@install" (CWD=/home/opam/.opam/5.3-opam/.opam-switch/build/camlp-streams.5.0.1)
-> compiled  camlp-streams.5.0.1
Processing 21/30: [num: make opam-modern] [ocamlfind: ./configure]
-> installed camlp-streams.5.0.1
Processing 22/30: [num: make opam-modern] [ocamlfind: ./configure]
+ /home/opam/.opam/opam-init/hooks/sandbox.sh "build" "./configure" "-bindir" "/home/opam/.opam/5.3-opam/bin" "-sitelib" "/home/opam/.opam/5.3-opam/lib" "-mandir" "/home/opam/.opam/5.3-opam/man" "-config" "/home/opam/.opam/5.3-opam/lib/findlib.conf" "-no-custom" "-no-camlp4" (CWD=/home/opam/.opam/5.3-opam/.opam-switch/build/ocamlfind.1.9.8)
- Welcome to findlib version 1.9.8
- Configuring core...
- Checking for #remove_directory...
- Testing threading model...
- systhread_supported: true
- Testing DLLs...
- Testing whether ppxopt can be supported...
- Checking for ocamlc -opaque...
- Checking for ocamlopt -g...
- Configuring libraries...
- unix: found (in +unix)
- dynlink: found (in +dynlink)
- bigarray: not present (possible since 4.08)
- compiler-libs: found
- dbm: not present (normal since 4.00)
- graphics: not present (normal since 4.09)
- num: not present (normal since 4.06)
- ocamlbuild: not present (normal since 4.03)
- ocamldoc: found (in +ocamldoc)
- raw_spacetime: not present (normal since 4.12)
- threads: found (in +threads)
- str: found (in +str)
- labltk: not present (normal since 4.02)
- native dynlink: found
- camlp4: disabled
- bytes: found, installing fake library
- Configuration for bytes written to site-lib-src/bytes/META
- Detecting compiler arguments: (extractor built) ok
- 
- About the OCAML core installation:
-     Standard library:      /home/opam/.opam/5.3-opam/lib/ocaml
-     Binaries:              /home/opam/.opam/5.3-opam/bin
-     Manual pages:          /home/opam/.opam/5.3-opam/man
-     Multi-threading type:  posix
- The directory of site-specific packages will be
-     site-lib:              /home/opam/.opam/5.3-opam/lib
- The configuration file is written to:
-     findlib config file:   /home/opam/.opam/5.3-opam/lib/findlib.conf
- Software will be installed:
-     Libraries:             in <site-lib>/findlib
-     Binaries:              /home/opam/.opam/5.3-opam/bin
-     Manual pages:          /home/opam/.opam/5.3-opam/man
-     topfind script:        /home/opam/.opam/5.3-opam/lib/ocaml
- Topfind ppxopt support:    yes
- Toolbox:                   no
- Link custom runtime:       no
- Need bytes compatibility:  no
- 
- Configuration has been written to Makefile.config
- 
- You can now do 'make all', and optionally 'make opt', to build ocamlfind.
Processing 22/30: [num: make opam-modern] [ocamlfind: make all]
+ /home/opam/.opam/opam-init/hooks/sandbox.sh "build" "make" "all" (CWD=/home/opam/.opam/5.3-opam/.opam-switch/build/ocamlfind.1.9.8)
- for p in findlib; do ( cd src/$p; make all ) || exit; done
- make[1]: Entering directory '/home/opam/.opam/5.3-opam/.opam-switch/build/ocamlfind.1.9.8/src/findlib'
- ocamllex fl_meta.mll
- 22 states, 392 transitions, table size 1700 bytes
- USE_CYGPATH="0"; \
- export USE_CYGPATH; \
- cat findlib_config.mlp | \
-          ../../tools/patch '@CONFIGFILE@' '/home/opam/.opam/5.3-opam/lib/findlib.conf' | \
-          ../../tools/patch '@STDLIB@' '/home/opam/.opam/5.3-opam/lib/ocaml' | \
-          ../../tools/patch '@RELATIVE_PATHS@' 'false' | \
- 	sed -e 's;@AUTOLINK@;true;g' \
- 	    -e 's;@SYSTEM@;linux;g' \
- 	     >findlib_config.ml
- if [ "true" = "true" ]; then                 \
- 	cp topfind.ml.in topfind.ml;                             \
- else                                                             \
- 	sed -e '/PPXOPT_BEGIN/,/PPXOPT_END/ d' topfind.ml.in     \
- 		> topfind.ml ;                                   \
- fi
- ocamldep *.ml *.mli >depend
- ocamlc -I +compiler-libs -opaque   -I +unix -I +dynlink -g -c fl_compat.ml
- ocamlc -I +compiler-libs -opaque   -I +unix -I +dynlink -g -c fl_split.ml
- ocamlc -I +compiler-libs -opaque   -I +unix -I +dynlink -g -c findlib_config.ml
- ocamlc -I +compiler-libs -opaque   -I +unix -I +dynlink -g -c fl_metatoken.ml
- ocamlc -I +compiler-libs -opaque   -I +unix -I +dynlink -g -c fl_meta.ml
- ocamlc -I +compiler-libs -opaque   -I +unix -I +dynlink -c fl_metascanner.mli
- ocamlc -I +compiler-libs -opaque   -I +unix -I +dynlink -g -c fl_metascanner.ml
- ocamlc -I +compiler-libs -opaque   -I +unix -I +dynlink -c fl_topo.mli
- ocamlc -I +compiler-libs -opaque   -I +unix -I +dynlink -g -c fl_topo.ml
- ocamlc -I +compiler-libs -opaque   -I +unix -I +dynlink -c fl_package_base.mli
- ocamlc -I +compiler-libs -opaque   -I +unix -I +dynlink -g -c fl_package_base.ml
- ocamlc -I +compiler-libs -opaque   -I +unix -I +dynlink -c findlib.mli
- ocamlc -I +compiler-libs -opaque   -I +unix -I +dynlink -g -c findlib.ml
- ocamlc -I +compiler-libs -opaque   -I +unix -I +dynlink -g -c fl_args.ml
- ocamlc -I +compiler-libs -opaque   -I +unix -I +dynlink -g -c fl_lint.ml
- ocamlc -I +compiler-libs -a -o findlib.cma fl_compat.cmo fl_split.cmo findlib_config.cmo fl_metatoken.cmo fl_meta.cmo fl_metascanner.cmo fl_topo.cmo fl_package_base.cmo findlib.cmo fl_args.cmo fl_lint.cmo
- ocamlc -I +compiler-libs -opaque   -I +unix -I +dynlink -g -c ocaml_args.ml
- ocamlc -I +compiler-libs -opaque   -I +unix -I +dynlink -g -c frontend.ml
- ocamlc -I +compiler-libs  -o ocamlfind -g findlib.cma unix.cma \
-            -I +unix -I +dynlink ocaml_args.cmo frontend.cmo
- ocamlc -I +compiler-libs -opaque   -I +unix -I +dynlink -c topfind.mli
- ocamlc -I +compiler-libs -opaque   -I +unix -I +dynlink -g -c topfind.ml
- File "topfind.ml", line 128, characters 40-63:
- 128 |                      match Hashtbl.find Toploop.directive_table "ppx" with
-                                               ^^^^^^^^^^^^^^^^^^^^^^^
- Alert deprecated: Toploop.directive_table
- 
- File "topfind.ml", line 258, characters 4-27:
- 258 |     Toploop.directive_table
-           ^^^^^^^^^^^^^^^^^^^^^^^
- Alert deprecated: Toploop.directive_table
- 
- File "topfind.ml", line 268, characters 4-27:
- 268 |     Toploop.directive_table
-           ^^^^^^^^^^^^^^^^^^^^^^^
- Alert deprecated: Toploop.directive_table
- 
- File "topfind.ml", line 280, characters 4-27:
- 280 |     Toploop.directive_table
-           ^^^^^^^^^^^^^^^^^^^^^^^
- Alert deprecated: Toploop.directive_table
- 
- File "topfind.ml", line 293, characters 4-27:
- 293 |     Toploop.directive_table
-           ^^^^^^^^^^^^^^^^^^^^^^^
- Alert deprecated: Toploop.directive_table
- 
- File "topfind.ml", line 307, characters 4-27:
- 307 |     Toploop.directive_table
-           ^^^^^^^^^^^^^^^^^^^^^^^
- Alert deprecated: Toploop.directive_table
- 
- File "topfind.ml", line 319, characters 4-27:
- 319 |     Toploop.directive_table
-           ^^^^^^^^^^^^^^^^^^^^^^^
- Alert deprecated: Toploop.directive_table
- ocamlc -I +compiler-libs -a -o findlib_top.cma topfind.cmo
- if [ "1" = "1" ]; then                        \
- 	cp topfind.in topfind.compat.in;                                                     \
- else                                                                  \
- 	sed -e '/REMOVE_DIRECTORY_BEGIN/,/REMOVE_DIRECTORY_END/ d' topfind.in \
- 		> topfind.compat.in ;                                                \
- fi
- USE_CYGPATH="0"; \
- export USE_CYGPATH; \
- cat topfind.compat.in | \
-          ../../tools/patch '@SITELIB@' '/home/opam/.opam/5.3-opam/lib' | \
-          ../../tools/patch '@RELATIVE_PATHS@' 'false' \
-     	    >topfind
- ocamlc -I +compiler-libs -opaque   -I +unix -I +dynlink -c fl_dynload.mli
- ocamlc -I +compiler-libs -opaque   -I +unix -I +dynlink -g -c fl_dynload.ml
- ocamlc -I +compiler-libs -a -o findlib_dynload.cma fl_dynload.cmo
- make[1]: Leaving directory '/home/opam/.opam/5.3-opam/.opam-switch/build/ocamlfind.1.9.8/src/findlib'
- make all-config
- make[1]: Entering directory '/home/opam/.opam/5.3-opam/.opam-switch/build/ocamlfind.1.9.8'
- if [ "false" = "true" ]; then \
-   make findlib-relative; \
-         else \
-   make findlib-absolute; \
- fi
- make[2]: Entering directory '/home/opam/.opam/5.3-opam/.opam-switch/build/ocamlfind.1.9.8'
- USE_CYGPATH="0"; \
- export USE_CYGPATH; \
- cat findlib.conf.in | \
-      tools/patch '@SITELIB@' '/home/opam/.opam/5.3-opam/lib' | \
- 		 tools/patch '@FINDLIB_PATH@' '/home/opam/.opam/5.3-opam/lib/ocaml:/home/opam/.opam/5.3-opam/lib' -p >findlib.conf
- if ./tools/cmd_from_same_dir ocamlc; then \
- 	echo 'ocamlc="ocamlc.opt"' >>findlib.conf; \
- fi
- if ./tools/cmd_from_same_dir ocamlopt; then \
- 	echo 'ocamlopt="ocamlopt.opt"' >>findlib.conf; \
- fi
- if ./tools/cmd_from_same_dir ocamldep; then \
- 	echo 'ocamldep="ocamldep.opt"' >>findlib.conf; \
- fi
- if ./tools/cmd_from_same_dir ocamldoc; then \
- 	echo 'ocamldoc="ocamldoc.opt"' >>findlib.conf; \
- fi
- make[2]: Leaving directory '/home/opam/.opam/5.3-opam/.opam-switch/build/ocamlfind.1.9.8'
- make[1]: Leaving directory '/home/opam/.opam/5.3-opam/.opam-switch/build/ocamlfind.1.9.8'
Processing 22/30: [num: make opam-modern] [ocamlfind: make opt]
+ /home/opam/.opam/opam-init/hooks/sandbox.sh "build" "make" "PROFILE=release" "opam-modern" (CWD=/home/opam/.opam/5.3-opam/.opam-switch/build/num.1.6)
- make -C src all
- make[1]: Entering directory '/home/opam/.opam/5.3-opam/.opam-switch/build/num.1.6/src'
- ocamlc -ccopt -DBNG_ARCH_amd64 -c bng.c
- ocamlc -ccopt -DBNG_ARCH_amd64 -c nat_stubs.c
- ocamlmklib -oc nums bng.o nat_stubs.o
- ocamlc -w +a-4-9-41-42-44-45-48  -bin-annot -g -safe-string -strict-sequence -strict-formats -I +compiler-libs -c int_misc.mli
- ocamlc -w +a-4-9-41-42-44-45-48  -bin-annot -g -safe-string -strict-sequence -strict-formats -I +compiler-libs -c int_misc.ml
- ocamlc -w +a-4-9-41-42-44-45-48  -bin-annot -g -safe-string -strict-sequence -strict-formats -I +compiler-libs -c nat.mli
- ocamlc -w +a-4-9-41-42-44-45-48  -bin-annot -g -safe-string -strict-sequence -strict-formats -I +compiler-libs -c nat.ml
- ocamlc -w +a-4-9-41-42-44-45-48  -bin-annot -g -safe-string -strict-sequence -strict-formats -I +compiler-libs -c big_int.mli
- ocamlc -w +a-4-9-41-42-44-45-48  -bin-annot -g -safe-string -strict-sequence -strict-formats -I +compiler-libs -c big_int.ml
- ocamlc -w +a-4-9-41-42-44-45-48  -bin-annot -g -safe-string -strict-sequence -strict-formats -I +compiler-libs -c arith_flags.mli
- ocamlc -w +a-4-9-41-42-44-45-48  -bin-annot -g -safe-string -strict-sequence -strict-formats -I +compiler-libs -c arith_flags.ml
- ocamlc -w +a-4-9-41-42-44-45-48  -bin-annot -g -safe-string -strict-sequence -strict-formats -I +compiler-libs -c ratio.mli
- ocamlc -w +a-4-9-41-42-44-45-48  -bin-annot -g -safe-string -strict-sequence -strict-formats -I +compiler-libs -c ratio.ml
- ocamlc -w +a-4-9-41-42-44-45-48  -bin-annot -g -safe-string -strict-sequence -strict-formats -I +compiler-libs -c num.mli
- ocamlc -w +a-4-9-41-42-44-45-48  -bin-annot -g -safe-string -strict-sequence -strict-formats -I +compiler-libs -c num.ml
- ocamlc -w +a-4-9-41-42-44-45-48  -bin-annot -g -safe-string -strict-sequence -strict-formats -I +compiler-libs -c arith_status.mli
- ocamlc -w +a-4-9-41-42-44-45-48  -bin-annot -g -safe-string -strict-sequence -strict-formats -I +compiler-libs -c arith_status.ml
- ocamlmklib -o nums -oc nums -linkall int_misc.cmo nat.cmo big_int.cmo arith_flags.cmo ratio.cmo num.cmo arith_status.cmo
- cp ../toplevel/num_top_printers.mli ../toplevel/num_top.mli ../toplevel/num_top_printers.ml ../toplevel/num_top.ml .
- ocamlc -w +a-4-9-41-42-44-45-48  -bin-annot -g -safe-string -strict-sequence -strict-formats -I +compiler-libs -c num_top_printers.mli
- ocamlc -w +a-4-9-41-42-44-45-48  -bin-annot -g -safe-string -strict-sequence -strict-formats -I +compiler-libs -c num_top_printers.ml
- ocamlc -w +a-4-9-41-42-44-45-48  -bin-annot -g -safe-string -strict-sequence -strict-formats -I +compiler-libs -c num_top.mli
- ocamlc -w +a-4-9-41-42-44-45-48  -bin-annot -g -safe-string -strict-sequence -strict-formats -I +compiler-libs -c num_top.ml
- ocamlc -w +a-4-9-41-42-44-45-48  -bin-annot -g -safe-string -strict-sequence -strict-formats -I +compiler-libs -a -o num_top.cma num_top_printers.cmo num_top.cmo
- echo 'version = "1.7~dev"' > META.top
- cat META.num-top.in >> META.top
- ocamlopt -w +a-4-9-41-42-44-45-48  -bin-annot -g -safe-string -strict-sequence -strict-formats -I +compiler-libs -c int_misc.ml
- ocamlopt -w +a-4-9-41-42-44-45-48  -bin-annot -g -safe-string -strict-sequence -strict-formats -I +compiler-libs -c nat.ml
- ocamlopt -w +a-4-9-41-42-44-45-48  -bin-annot -g -safe-string -strict-sequence -strict-formats -I +compiler-libs -c big_int.ml
- ocamlopt -w +a-4-9-41-42-44-45-48  -bin-annot -g -safe-string -strict-sequence -strict-formats -I +compiler-libs -c arith_flags.ml
- ocamlopt -w +a-4-9-41-42-44-45-48  -bin-annot -g -safe-string -strict-sequence -strict-formats -I +compiler-libs -c ratio.ml
- ocamlopt -w +a-4-9-41-42-44-45-48  -bin-annot -g -safe-string -strict-sequence -strict-formats -I +compiler-libs -c num.ml
- ocamlopt -w +a-4-9-41-42-44-45-48  -bin-annot -g -safe-string -strict-sequence -strict-formats -I +compiler-libs -c arith_status.ml
- ocamlmklib -o nums -oc nums -linkall int_misc.cmx nat.cmx big_int.cmx arith_flags.cmx ratio.cmx num.cmx arith_status.cmx
- ocamlopt -w +a-4-9-41-42-44-45-48  -bin-annot -g -safe-string -strict-sequence -strict-formats -I +compiler-libs -I . -shared -o nums.cmxs nums.cmxa
- make[1]: Leaving directory '/home/opam/.opam/5.3-opam/.opam-switch/build/num.1.6/src'
- cp src/num-modern.install num.install
-> compiled  num.1.6
Processing 22/30: [ocamlfind: make opt]
-> installed num.1.6
Processing 23/30: [ocamlfind: make opt]
+ /home/opam/.opam/opam-init/hooks/sandbox.sh "build" "make" "opt" (CWD=/home/opam/.opam/5.3-opam/.opam-switch/build/ocamlfind.1.9.8)
- for p in findlib; do ( cd src/$p; make opt ) || exit; done
- make[1]: Entering directory '/home/opam/.opam/5.3-opam/.opam-switch/build/ocamlfind.1.9.8/src/findlib'
- ocamlopt -I +compiler-libs -g -opaque  -I +unix -I +dynlink -c fl_compat.ml
- ocamlopt -I +compiler-libs -g -opaque  -I +unix -I +dynlink -c fl_split.ml
- ocamlopt -I +compiler-libs -g -opaque  -I +unix -I +dynlink -c findlib_config.ml
- ocamlopt -I +compiler-libs -g -opaque  -I +unix -I +dynlink -c fl_metatoken.ml
- ocamlopt -I +compiler-libs -g -opaque  -I +unix -I +dynlink -c fl_meta.ml
- ocamlopt -I +compiler-libs -g -opaque  -I +unix -I +dynlink -c fl_metascanner.ml
- ocamlopt -I +compiler-libs -g -opaque  -I +unix -I +dynlink -c fl_topo.ml
- ocamlopt -I +compiler-libs -g -opaque  -I +unix -I +dynlink -c fl_package_base.ml
- ocamlopt -I +compiler-libs -g -opaque  -I +unix -I +dynlink -c findlib.ml
- ocamlopt -I +compiler-libs -g -opaque  -I +unix -I +dynlink -c fl_args.ml
- ocamlopt -I +compiler-libs -g -opaque  -I +unix -I +dynlink -c fl_lint.ml
- ocamlopt -I +compiler-libs -g -a -o findlib.cmxa fl_compat.cmx fl_split.cmx findlib_config.cmx fl_metatoken.cmx fl_meta.cmx fl_metascanner.cmx fl_topo.cmx fl_package_base.cmx findlib.cmx fl_args.cmx fl_lint.cmx
- if [ 1 -gt 0 ]; then \
-     ocamlopt -I +compiler-libs -g -shared -o findlib.cmxs fl_compat.cmx fl_split.cmx findlib_config.cmx fl_metatoken.cmx fl_meta.cmx fl_metascanner.cmx fl_topo.cmx fl_package_base.cmx findlib.cmx fl_args.cmx fl_lint.cmx; \
- fi
- ocamlopt -I +compiler-libs -g -opaque  -I +unix -I +dynlink -c ocaml_args.ml
- ocamlopt -I +compiler-libs -g -opaque  -I +unix -I +dynlink -c frontend.ml
- ocamlopt -I +compiler-libs -g -o ocamlfind_opt findlib.cmxa unix.cmxa \
- 	   -I +unix -I +dynlink ocaml_args.cmx frontend.cmx
- ocamlopt -I +compiler-libs -g -opaque  -I +unix -I +dynlink -c topfind.ml
- File "topfind.ml", line 128, characters 40-63:
- 128 |                      match Hashtbl.find Toploop.directive_table "ppx" with
-                                               ^^^^^^^^^^^^^^^^^^^^^^^
- Alert deprecated: Toploop.directive_table
- 
- File "topfind.ml", line 258, characters 4-27:
- 258 |     Toploop.directive_table
-           ^^^^^^^^^^^^^^^^^^^^^^^
- Alert deprecated: Toploop.directive_table
- 
- File "topfind.ml", line 268, characters 4-27:
- 268 |     Toploop.directive_table
-           ^^^^^^^^^^^^^^^^^^^^^^^
- Alert deprecated: Toploop.directive_table
- 
- File "topfind.ml", line 280, characters 4-27:
- 280 |     Toploop.directive_table
-           ^^^^^^^^^^^^^^^^^^^^^^^
- Alert deprecated: Toploop.directive_table
- 
- File "topfind.ml", line 293, characters 4-27:
- 293 |     Toploop.directive_table
-           ^^^^^^^^^^^^^^^^^^^^^^^
- Alert deprecated: Toploop.directive_table
- 
- File "topfind.ml", line 307, characters 4-27:
- 307 |     Toploop.directive_table
-           ^^^^^^^^^^^^^^^^^^^^^^^
- Alert deprecated: Toploop.directive_table
- 
- File "topfind.ml", line 319, characters 4-27:
- 319 |     Toploop.directive_table
-           ^^^^^^^^^^^^^^^^^^^^^^^
- Alert deprecated: Toploop.directive_table
- ocamlopt -I +compiler-libs -g -a -o findlib_top.cmxa topfind.cmx
- if [ 1 -gt 0 ]; then \
-     ocamlopt -I +compiler-libs -g -shared -o findlib_top.cmxs topfind.cmx; \
- fi
- ocamlopt -I +compiler-libs -g -opaque  -I +unix -I +dynlink -c fl_dynload.ml
- ocamlopt -I +compiler-libs -g -a -o findlib_dynload.cmxa fl_dynload.cmx
- if [ 1 -gt 0 ]; then \
-     ocamlopt -I +compiler-libs -g -shared -o findlib_dynload.cmxs fl_dynload.cmx; \
- fi
- make[1]: Leaving directory '/home/opam/.opam/5.3-opam/.opam-switch/build/ocamlfind.1.9.8/src/findlib'
-> compiled  ocamlfind.1.9.8
Processing 24/30: [ocamlfind: make install]
+ /home/opam/.opam/opam-init/hooks/sandbox.sh "install" "make" "install" (CWD=/home/opam/.opam/5.3-opam/.opam-switch/build/ocamlfind.1.9.8)
- if [ "0" -eq 1 ]; then \
-     for x in camlp4 dbm graphics labltk num ocamlbuild; do \
-       if [ -f "/home/opam/.opam/5.3-opam/lib/$x/META" ]; then \
-         if ! grep -Fq '[distributed with Ocaml]' "//home/opam/.opam/5.3-opam/lib/$x/META"; then \
-           rm -f site-lib-src/$x/META; \
-         fi; \
-       fi; \
-     done; \
-     test -f "site-lib-src/num/META" || rm -f "site-lib-src/num-top/META"; \
-   fi
- echo 'SITELIB_META =' > Makefile.packages.in
- for x in `ls site-lib-src`; do test ! -f "site-lib-src/$x/META" || echo $x >> Makefile.packages.in; done
- tr '\n' ' ' < Makefile.packages.in > Makefile.packages
- rm Makefile.packages.in
- install -d "/home/opam/.opam/5.3-opam/bin"
- install -d "/home/opam/.opam/5.3-opam/man"
- make install-config
- make[1]: Entering directory '/home/opam/.opam/5.3-opam/.opam-switch/build/ocamlfind.1.9.8'
- install -d "`dirname \"/home/opam/.opam/5.3-opam/lib/findlib.conf\"`"
- test -f "/home/opam/.opam/5.3-opam/lib/findlib.conf" || cp findlib.conf "/home/opam/.opam/5.3-opam/lib/findlib.conf"
- make[1]: Leaving directory '/home/opam/.opam/5.3-opam/.opam-switch/build/ocamlfind.1.9.8'
- for p in findlib; do ( cd src/$p; make install ); done
- make[1]: Entering directory '/home/opam/.opam/5.3-opam/.opam-switch/build/ocamlfind.1.9.8/src/findlib'
- install -d "/home/opam/.opam/5.3-opam/lib/findlib"
- install -d "/home/opam/.opam/5.3-opam/bin"
- test 1 -eq 0 || install -d "/home/opam/.opam/5.3-opam/lib/ocaml"
- test 1 -eq 0 || cp topfind "/home/opam/.opam/5.3-opam/lib/ocaml/"
- files=` ../../tools/collect_files ../../Makefile.config \
- findlib.cmi findlib.mli findlib.cma findlib.cmxa findlib.a findlib.cmxs \
- findlib_config.cmi findlib_config.ml topfind.cmi topfind.mli \
- fl_args.cmi fl_lint.cmi fl_meta.cmi fl_split.cmi fl_topo.cmi ocaml_args.cmi \
- fl_package_base.mli fl_package_base.cmi fl_metascanner.mli fl_metascanner.cmi \
- fl_metatoken.cmi findlib_top.cma findlib_top.cmxa findlib_top.a findlib_top.cmxs \
- findlib_dynload.cma findlib_dynload.cmxa findlib_dynload.a findlib_dynload.cmxs fl_dynload.mli fl_dynload.cmi \
- META` && \
- cp $files "/home/opam/.opam/5.3-opam/lib/findlib/"
- f="ocamlfind"; { test -f ocamlfind_opt && f="ocamlfind_opt"; }; \
- install -c $f "/home/opam/.opam/5.3-opam/bin/ocamlfind"
- # the following "if" block is only needed for 4.00beta2
- if [ 1 -eq 0 -a -f "/home/opam/.opam/5.3-opam/lib/ocaml/compiler-libs/topdirs.cmi" ]; then \
-     cd "/home/opam/.opam/5.3-opam/lib/ocaml/compiler-libs/"; \
-     cp topdirs.cmi toploop.cmi "/home/opam/.opam/5.3-opam/lib/findlib/"; \
- fi
- make[1]: Leaving directory '/home/opam/.opam/5.3-opam/.opam-switch/build/ocamlfind.1.9.8/src/findlib'
- make install-meta
- make[1]: Entering directory '/home/opam/.opam/5.3-opam/.opam-switch/build/ocamlfind.1.9.8'
- for x in bytes ; do install -d "/home/opam/.opam/5.3-opam/lib/$x"; cp site-lib-src/$x/META "/home/opam/.opam/5.3-opam/lib/$x/META.tmp" && mv "/home/opam/.opam/5.3-opam/lib/$x/META.tmp" "/home/opam/.opam/5.3-opam/lib/$x/META"; done
- install -d "/home/opam/.opam/5.3-opam/lib/findlib"; cp Makefile.packages "/home/opam/.opam/5.3-opam/lib/findlib/Makefile.packages"
- make[1]: Leaving directory '/home/opam/.opam/5.3-opam/.opam-switch/build/ocamlfind.1.9.8'
- test ! -f 'site-lib-src/num-top/META' || { cd src/findlib; make install-num-top; }
- test ! -f 'site-lib-src/camlp4/META' ||	install -c tools/safe_camlp4 "/home/opam/.opam/5.3-opam/bin"
- make install-doc
- make[1]: Entering directory '/home/opam/.opam/5.3-opam/.opam-switch/build/ocamlfind.1.9.8'
- install -d "/home/opam/.opam/5.3-opam/man/man1" "/home/opam/.opam/5.3-opam/man/man3" "/home/opam/.opam/5.3-opam/man/man5"
- cp doc/ref-man/ocamlfind.1 "/home/opam/.opam/5.3-opam/man/man1"
- cp: cannot stat 'doc/ref-man/ocamlfind.1': No such file or directory
- make[1]: [Makefile:91: install-doc] Error 1 (ignored)
- cp doc/ref-man/META.5 doc/ref-man/site-lib.5 doc/ref-man/findlib.conf.5 "/home/opam/.opam/5.3-opam/man/man5"
- cp: cannot stat 'doc/ref-man/META.5': No such file or directory
- cp: cannot stat 'doc/ref-man/site-lib.5': No such file or directory
- cp: cannot stat 'doc/ref-man/findlib.conf.5': No such file or directory
- make[1]: [Makefile:92: install-doc] Error 1 (ignored)
- make[1]: Leaving directory '/home/opam/.opam/5.3-opam/.opam-switch/build/ocamlfind.1.9.8'
-> installed ocamlfind.1.9.8
Processing 25/30: [batteries: dune build]
+ /home/opam/.opam/opam-init/hooks/sandbox.sh "build" "dune" "build" "-p" "batteries" "-j" "255" "@install" (CWD=/home/opam/.opam/5.3-opam/.opam-switch/build/batteries.3.9.0)
-> compiled  batteries.3.9.0
-> installed batteries.3.9.0
Processing 27/30: [line_oriented: dune build]
+ /home/opam/.opam/opam-init/hooks/sandbox.sh "build" "dune" "build" "-p" "line_oriented" "-j" "255" (CWD=/home/opam/.opam/5.3-opam/.opam-switch/build/line_oriented.1.3.0)
-> compiled  line_oriented.1.3.0
-> installed line_oriented.1.3.0
Processing 29/30: [fasmifra: dune build]
+ /home/opam/.opam/opam-init/hooks/sandbox.sh "build" "dune" "build" "-p" "fasmifra" "-j" "255" (CWD=/home/opam/.opam/5.3-opam/.opam-switch/build/fasmifra.2.1.0)
-> compiled  fasmifra.2.1.0
Processing 30/30: [fasmifra: cp]
+ /home/opam/.opam/opam-init/hooks/sandbox.sh "install" "cp" "bin/fasmifra_fragment.py" "/home/opam/.opam/5.3-opam/bin/fasmifra_fragment.py" (CWD=/home/opam/.opam/5.3-opam/.opam-switch/build/fasmifra.2.1.0)
+ /home/opam/.opam/opam-init/hooks/sandbox.sh "install" "cp" "bin/fasmifra_rm_cut_bonds.sh" "/home/opam/.opam/5.3-opam/bin/fasmifra_rm_cut_bonds.sh" (CWD=/home/opam/.opam/5.3-opam/.opam-switch/build/fasmifra.2.1.0)
+ /home/opam/.opam/opam-init/hooks/sandbox.sh "install" "cp" "bin/fasmifra_frag_dict.py" "/home/opam/.opam/5.3-opam/bin/fasmifra_frag_dict.py" (CWD=/home/opam/.opam/5.3-opam/.opam-switch/build/fasmifra.2.1.0)
+ /home/opam/.opam/opam-init/hooks/sandbox.sh "install" "cp" "bin/fasmifra_GA.sh" "/home/opam/.opam/5.3-opam/bin/fasmifra_GA.sh" (CWD=/home/opam/.opam/5.3-opam/.opam-switch/build/fasmifra.2.1.0)
-> installed fasmifra.2.1.0
Done.
# To update the current shell environment, run: eval $(opam env)
2025-08-11 14:55.04 ---> saved as "887d7b3ad93fd22f515b989f7d46bf1832736130b575cae51747d6516fa36d1c"
Job succeeded