Building on x86-bm-c2.sw.ocaml.org (from ocaml/opam:debian-unstable) 2025-04-21 13:10.38 ---> using "0acd5aeaa8f7bc314514d9795d14a7f12ec72a6a5b11c5904350189734c6859b" from cache /: (user (uid 1000) (gid 1000)) /: (env OPAMPRECISETRACKING 1) /: (env OPAMUTF8 never) /: (env OPAMEXTERNALSOLVER builtin-0install) /: (env OPAMCRITERIA +removed) /: (env CI true) /: (env OPAM_HEALTH_CHECK_CI true) /: (run (shell "sudo ln -f /usr/bin/opam-dev /usr/bin/opam")) 2025-04-21 13:10.38 ---> using "40df4fa4cdfc68a5fa7a326047e82a7adc5df52b8059d4a7b745bdd50aad56e7" from cache /: (run (network host) (shell "rm -rf ~/opam-repository && git clone -q 'https://github.com/ocaml/opam-repository' ~/opam-repository && git -C ~/opam-repository checkout -q 999bff3ed88d26f76ff7eaddbfa7af49ed4737dc")) 2025-04-21 13:10.38 ---> using "826c465c9ef28e6e0f0e6975e12eb0e91d1a070a9820c6e966bf86cdd08156ec" from cache /: (run (shell "rm -rf ~/.opam && opam init -ya --bare --config ~/.opamrc-sandbox ~/opam-repository")) Configuring from /home/opam/.opamrc-sandbox, then /home/opam/.opamrc, and finally from built-in defaults. Checking for available remotes: rsync and local, git. - you won't be able to use mercurial repositories unless you install the hg command on your system. - you won't be able to use darcs repositories unless you install the darcs command on your system. <><> Fetching repository information ><><><><><><><><><><><><><><><><><><><><><> [default] Initialised User configuration: ~/.profile is already up-to-date. [NOTE] Make sure that ~/.profile is well sourced in your ~/.bashrc. 2025-04-21 13:10.38 ---> using "1540013f15d4984bcd7cc6765515a9d8102147bba12b5acc1ee668d894197f46" from cache /: (run (cache (opam-archives (target /home/opam/.opam/download-cache)) (opam-dune-cache (target /home/opam/.cache/dune))) (network host) (shell "opam switch create --repositories=default '5.3-opam' '5.3.0'")) <><> Installing new switch packages <><><><><><><><><><><><><><><><><><><><><><> Switch invariant: ["ocaml-base-compiler" {= "5.3.0"} | "ocaml-system" {= "5.3.0"}] <><> Processing actions <><><><><><><><><><><><><><><><><><><><><><><><><><><><> -> retrieved ocaml-config.3 (cached) -> installed base-bigarray.base -> installed base-threads.base -> installed base-unix.base -> installed ocaml-options-vanilla.1 -> retrieved ocaml-compiler.5.3.0 (cached) -> installed ocaml-compiler.5.3.0 -> installed ocaml-base-compiler.5.3.0 -> installed ocaml-config.3 -> installed ocaml.5.3.0 -> installed base-domains.base -> installed base-effects.base -> installed base-nnp.base Done. # To update the current shell environment, run: eval $(opam env --switch=5.3-opam) 2025-04-21 13:10.38 ---> using "4b7ebd6fc6e027276a8fd8ed82dcfe64a2b16cde6b383aaa055cfbd219af0b8f" from cache /: (run (network host) (shell "opam update --depexts")) + /usr/bin/sudo "apt-get" "update" - Get:1 http://deb.debian.org/debian unstable InRelease [205 kB] - Get:2 http://deb.debian.org/debian unstable/main amd64 Packages.diff/Index [63.6 kB] - Get:3 http://deb.debian.org/debian unstable/main amd64 Packages T-2025-04-21-0804.17-F-2025-04-13-0805.00.pdiff [520 kB] - Get:3 http://deb.debian.org/debian unstable/main amd64 Packages T-2025-04-21-0804.17-F-2025-04-13-0805.00.pdiff [520 kB] - Fetched 788 kB in 2s (334 kB/s) - Reading package lists... - 2025-04-21 13:10.38 ---> using "fd7da0145060fb8248c502d7ff82eb257b63940163519960cbcb6fa092a89dc1" from cache /: (run (cache (opam-archives (target /home/opam/.opam/download-cache)) (opam-dune-cache (target /home/opam/.cache/dune))) (network host) (shell "opam pin add -k version dune $(opam show -f version dune)")) dune is now pinned to version 3.18.1 The following actions will be performed: === install 1 package - install dune 3.18.1 (pinned) <><> Processing actions <><><><><><><><><><><><><><><><><><><><><><><><><><><><> -> retrieved dune.3.18.1 (cached) -> installed dune.3.18.1 Done. # To update the current shell environment, run: eval $(opam env) 2025-04-21 13:10.38 ---> using "ae66d3f1c9b89d46f904980ee2c923d9326a9bf30223b37a1b81732d47784d8c" from cache /: (env DUNE_CACHE enabled) /: (env DUNE_CACHE_TRANSPORT direct) /: (env DUNE_CACHE_DUPLICATION copy) /: (run (cache (opam-archives (target /home/opam/.opam/download-cache)) (opam-dune-cache (target /home/opam/.cache/dune))) (network host) (shell "opam remove -y lbvs_consent.2.2.0\ \nopam install -vy lbvs_consent.2.2.0\ \nres=$?\ \nif [ $res = 31 ]; then\ \n if opam show -f x-ci-accept-failures: lbvs_consent.2.2.0 | grep -q 'debian-unstable'; then\ \n echo \"This package failed and has been disabled for CI using the 'x-ci-accept-failures' field.\"\ \n exit 69\ \n fi\ \nfi \ \n\ \n\ \nexit $res")) [NOTE] lbvs_consent.2.2.0 is not installed. Nothing to do. The following actions will be performed: === install 35 packages - install base-bytes base [required by dokeysto] - install batteries 3.9.0 [required by lbvs_consent] - install bitv 2.0 [required by lbvs_consent] - install camlp-streams 5.0.1 [required by batteries] - install camlzip 1.13 [required by lbvs_consent] - install conf-autoconf 0.2 [required by cpu] - install conf-boost 1 [required by lbvs_consent] - install conf-openbabel 0.1 [required by lbvs_consent] - install conf-pkg-config 4 [required by lbvs_consent] - install conf-python-3 9.0.0 [required by lbvs_consent] - install conf-rdkit 1 [required by lbvs_consent] - install conf-zlib 1 [required by camlzip] - install cpm 12.2.0 [required by lbvs_consent] - install cpu 2.0.0 [required by parany] - install csexp 1.5.2 [required by dune-configurator] - install dokeysto 4.0.1 [required by lbvs_consent] - install dolog 6.0.0 [required by lbvs_consent] - install dune-configurator 3.18.1 [required by extunix] - install extunix 0.4.4 [required by dokeysto] - install lbvs_consent 2.2.0 - install minicli 5.0.2 [required by lbvs_consent] - install num 1.5-1 [required by batteries] - install ocaml-compiler-libs v0.17.0 [required by ppxlib] - install ocamlfind 1.9.8 [required by batteries, camlzip] - install ounit2 2.2.7 [required by qcheck-ounit] - install parany 14.0.1 [required by lbvs_consent] - install ppx_derivers 1.2.1 [required by ppxlib] - install ppxlib 0.36.0 [required by extunix] - install qcheck 0.25 [required by lbvs_consent] - install qcheck-core 0.25 [required by qcheck] - install qcheck-ounit 0.25 [required by qcheck] - install seq base [required by ounit2] - install sexplib0 v0.17.0 [required by ppxlib] - install stdlib-shims 0.3.0 [required by ppxlib, ounit2] - install vpt 5.0.0 [required by lbvs_consent] The following system packages will first need to be installed: autoconf libboost-dev libopenbabel-dev librdkit-dev pkg-config python3 python3-rdkit zlib1g-dev <><> Handling external dependencies <><><><><><><><><><><><><><><><><><><><><><> opam believes some required external dependencies are missing. opam can: > 1. Run apt-get to install them (may need root/sudo access) 2. Display the recommended apt-get command and wait while you run it manually (e.g. in another terminal) 3. Continue anyway, and, upon success, permanently register that this external dependency is present, but not detectable 4. Abort the installation [1/2/3/4] 1 + /usr/bin/sudo "apt-get" "install" "-qq" "-yy" "autoconf" "libboost-dev" "libopenbabel-dev" "librdkit-dev" "pkg-config" "python3" "python3-rdkit" "zlib1g-dev" - Preconfiguring packages ... - Selecting previously unselected package libpython3.13-minimal:amd64. - (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 19596 files and directories currently installed.) - Preparing to unpack .../libpython3.13-minimal_3.13.3-2_amd64.deb ... - Unpacking libpython3.13-minimal:amd64 (3.13.3-2) ... - Selecting previously unselected package python3.13-minimal. - Preparing to unpack .../python3.13-minimal_3.13.3-2_amd64.deb ... - Unpacking python3.13-minimal (3.13.3-2) ... - Setting up libpython3.13-minimal:amd64 (3.13.3-2) ... - Setting up python3.13-minimal (3.13.3-2) ... - Selecting previously unselected package python3-minimal. - (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 19921 files and directories currently installed.) - Preparing to unpack .../0-python3-minimal_3.13.3-1_amd64.deb ... - Unpacking python3-minimal (3.13.3-1) ... - Selecting previously unselected package media-types. - Preparing to unpack .../1-media-types_13.0.0_all.deb ... - Unpacking media-types (13.0.0) ... - Selecting previously unselected package readline-common. - Preparing to unpack .../2-readline-common_8.2-6_all.deb ... - Unpacking readline-common (8.2-6) ... - Selecting previously unselected package libreadline8t64:amd64. - Preparing to unpack .../3-libreadline8t64_8.2-6_amd64.deb ... - Adding 'diversion of /lib/x86_64-linux-gnu/libhistory.so.8 to /lib/x86_64-linux-gnu/libhistory.so.8.usr-is-merged by libreadline8t64' - Adding 'diversion of /lib/x86_64-linux-gnu/libhistory.so.8.2 to /lib/x86_64-linux-gnu/libhistory.so.8.2.usr-is-merged by libreadline8t64' - Adding 'diversion of /lib/x86_64-linux-gnu/libreadline.so.8 to /lib/x86_64-linux-gnu/libreadline.so.8.usr-is-merged by libreadline8t64' - Adding 'diversion of /lib/x86_64-linux-gnu/libreadline.so.8.2 to /lib/x86_64-linux-gnu/libreadline.so.8.2.usr-is-merged by libreadline8t64' - Unpacking libreadline8t64:amd64 (8.2-6) ... - Selecting previously unselected package libpython3.13-stdlib:amd64. - Preparing to unpack .../4-libpython3.13-stdlib_3.13.3-2_amd64.deb ... - Unpacking libpython3.13-stdlib:amd64 (3.13.3-2) ... - Selecting previously unselected package python3.13. - Preparing to unpack .../5-python3.13_3.13.3-2_amd64.deb ... - Unpacking python3.13 (3.13.3-2) ... - Selecting previously unselected package libpython3-stdlib:amd64. - Preparing to unpack .../6-libpython3-stdlib_3.13.3-1_amd64.deb ... - Unpacking libpython3-stdlib:amd64 (3.13.3-1) ... - Setting up python3-minimal (3.13.3-1) ... - Selecting previously unselected package python3. - (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 20404 files and directories currently installed.) - Preparing to unpack .../00-python3_3.13.3-1_amd64.deb ... - Unpacking python3 (3.13.3-1) ... - Selecting previously unselected package python3-numpy-dev:amd64. - Preparing to unpack .../01-python3-numpy-dev_1%3a2.2.4+ds-1_amd64.deb ... - Unpacking python3-numpy-dev:amd64 (1:2.2.4+ds-1) ... - Selecting previously unselected package libblas3:amd64. - Preparing to unpack .../02-libblas3_3.12.1-2_amd64.deb ... - Unpacking libblas3:amd64 (3.12.1-2) ... - Selecting previously unselected package libgfortran5:amd64. - Preparing to unpack .../03-libgfortran5_14.2.0-19_amd64.deb ... - Unpacking libgfortran5:amd64 (14.2.0-19) ... - Selecting previously unselected package liblapack3:amd64. - Preparing to unpack .../04-liblapack3_3.12.1-2_amd64.deb ... - Unpacking liblapack3:amd64 (3.12.1-2) ... - Selecting previously unselected package python3-numpy. - Preparing to unpack .../05-python3-numpy_1%3a2.2.4+ds-1_amd64.deb ... - Unpacking python3-numpy (1:2.2.4+ds-1) ... - Selecting previously unselected package m4. - Preparing to unpack .../06-m4_1.4.19-8_amd64.deb ... - Unpacking m4 (1.4.19-8) ... - Selecting previously unselected package autoconf. - Preparing to unpack .../07-autoconf_2.72-3.1_all.deb ... - Unpacking autoconf (2.72-3.1) ... - Selecting previously unselected package autotools-dev. - Preparing to unpack .../08-autotools-dev_20240727.1_all.deb ... - Unpacking autotools-dev (20240727.1) ... - Selecting previously unselected package automake. - Preparing to unpack .../09-automake_1%3a1.17-4_all.deb ... - Unpacking automake (1:1.17-4) ... - Selecting previously unselected package fonts-dejavu-mono. - Preparing to unpack .../10-fonts-dejavu-mono_2.37-8_all.deb ... - Unpacking fonts-dejavu-mono (2.37-8) ... - Selecting previously unselected package fonts-dejavu-core. - Preparing to unpack .../11-fonts-dejavu-core_2.37-8_all.deb ... - Unpacking fonts-dejavu-core (2.37-8) ... - Selecting previously unselected package fonts-freefont-ttf. - Preparing to unpack .../12-fonts-freefont-ttf_20211204+svn4273-2_all.deb ... - Unpacking fonts-freefont-ttf (20211204+svn4273-2) ... - Selecting previously unselected package fontconfig-config. - Preparing to unpack .../13-fontconfig-config_2.15.0-2.3_amd64.deb ... - Unpacking fontconfig-config (2.15.0-2.3) ... - Selecting previously unselected package libboost1.83-dev:amd64. - Preparing to unpack .../14-libboost1.83-dev_1.83.0-4.2_amd64.deb ... - Unpacking libboost1.83-dev:amd64 (1.83.0-4.2) ... - Selecting previously unselected package libboost-dev:amd64. - Preparing to unpack .../15-libboost-dev_1.83.0.2+b2_amd64.deb ... - Unpacking libboost-dev:amd64 (1.83.0.2+b2) ... - Selecting previously unselected package libboost-iostreams1.83.0:amd64. - Preparing to unpack .../16-libboost-iostreams1.83.0_1.83.0-4.2_amd64.deb ... - Unpacking libboost-iostreams1.83.0:amd64 (1.83.0-4.2) ... - Selecting previously unselected package libboost-python1.83.0. - Preparing to unpack .../17-libboost-python1.83.0_1.83.0-4.2_amd64.deb ... - Unpacking libboost-python1.83.0 (1.83.0-4.2) ... - Selecting previously unselected package libboost-numpy1.83.0. - Preparing to unpack .../18-libboost-numpy1.83.0_1.83.0-4.2_amd64.deb ... - Unpacking libboost-numpy1.83.0 (1.83.0-4.2) ... - Selecting previously unselected package libboost-serialization1.83.0:amd64. - Preparing to unpack .../19-libboost-serialization1.83.0_1.83.0-4.2_amd64.deb ... - Unpacking libboost-serialization1.83.0:amd64 (1.83.0-4.2) ... - Selecting previously unselected package libpng16-16t64:amd64. - Preparing to unpack .../20-libpng16-16t64_1.6.47-1.1_amd64.deb ... - Unpacking libpng16-16t64:amd64 (1.6.47-1.1) ... - Selecting previously unselected package libfreetype6:amd64. - Preparing to unpack .../21-libfreetype6_2.13.3+dfsg-1_amd64.deb ... - Unpacking libfreetype6:amd64 (2.13.3+dfsg-1) ... - Selecting previously unselected package libfontconfig1:amd64. - Preparing to unpack .../22-libfontconfig1_2.15.0-2.3_amd64.deb ... - Unpacking libfontconfig1:amd64 (2.15.0-2.3) ... - Selecting previously unselected package libpixman-1-0:amd64. - Preparing to unpack .../23-libpixman-1-0_0.44.0-3_amd64.deb ... - Unpacking libpixman-1-0:amd64 (0.44.0-3) ... - Selecting previously unselected package libxcb-render0:amd64. - Preparing to unpack .../24-libxcb-render0_1.17.0-2+b1_amd64.deb ... - Unpacking libxcb-render0:amd64 (1.17.0-2+b1) ... - Selecting previously unselected package libxcb-shm0:amd64. - Preparing to unpack .../25-libxcb-shm0_1.17.0-2+b1_amd64.deb ... - Unpacking libxcb-shm0:amd64 (1.17.0-2+b1) ... - Selecting previously unselected package libxrender1:amd64. - Preparing to unpack .../26-libxrender1_1%3a0.9.12-1_amd64.deb ... - Unpacking libxrender1:amd64 (1:0.9.12-1) ... - Selecting previously unselected package libcairo2:amd64. - Preparing to unpack .../27-libcairo2_1.18.4-1+b1_amd64.deb ... - Unpacking libcairo2:amd64 (1.18.4-1+b1) ... - Selecting previously unselected package libcoordgen3:amd64. - Preparing to unpack .../28-libcoordgen3_3.0.2-1+b2_amd64.deb ... - Unpacking libcoordgen3:amd64 (3.0.2-1+b2) ... - Selecting previously unselected package libinchi1.07. - Preparing to unpack .../29-libinchi1.07_1.07.3+dfsg-1_amd64.deb ... - Unpacking libinchi1.07 (1.07.3+dfsg-1) ... - Selecting previously unselected package libmaeparser1:amd64. - Preparing to unpack .../30-libmaeparser1_1.3.1-1+b2_amd64.deb ... - Unpacking libmaeparser1:amd64 (1.3.1-1+b2) ... - Selecting previously unselected package libxml2:amd64. - Preparing to unpack .../31-libxml2_2.12.7+dfsg+really2.9.14-0.4_amd64.deb ... - Unpacking libxml2:amd64 (2.12.7+dfsg+really2.9.14-0.4) ... - Selecting previously unselected package libopenbabel7. - Preparing to unpack .../32-libopenbabel7_3.1.1+dfsg-12_amd64.deb ... - Unpacking libopenbabel7 (3.1.1+dfsg-12) ... - Selecting previously unselected package libopenbabel-dev. - Preparing to unpack .../33-libopenbabel-dev_3.1.1+dfsg-12_amd64.deb ... - Unpacking libopenbabel-dev (3.1.1+dfsg-12) ... - Selecting previously unselected package libpkgconf3:amd64. - Preparing to unpack .../34-libpkgconf3_1.8.1-4_amd64.deb ... - Unpacking libpkgconf3:amd64 (1.8.1-4) ... - Selecting previously unselected package librdkit1t64. - Preparing to unpack .../35-librdkit1t64_202503.1-2_amd64.deb ... - Unpacking librdkit1t64 (202503.1-2) ... - Selecting previously unselected package librdkit-dev. - Preparing to unpack .../36-librdkit-dev_202503.1-2_amd64.deb ... - Unpacking librdkit-dev (202503.1-2) ... - Selecting previously unselected package pkgconf-bin. - Preparing to unpack .../37-pkgconf-bin_1.8.1-4_amd64.deb ... - Unpacking pkgconf-bin (1.8.1-4) ... - Selecting previously unselected package pkgconf:amd64. - Preparing to unpack .../38-pkgconf_1.8.1-4_amd64.deb ... - Unpacking pkgconf:amd64 (1.8.1-4) ... - Selecting previously unselected package pkg-config:amd64. - Preparing to unpack .../39-pkg-config_1.8.1-4_amd64.deb ... - Unpacking pkg-config:amd64 (1.8.1-4) ... - Selecting previously unselected package rdkit-data. - Preparing to unpack .../40-rdkit-data_202503.1-2_all.deb ... - Unpacking rdkit-data (202503.1-2) ... - Selecting previously unselected package python3-rdkit. - Preparing to unpack .../41-python3-rdkit_202503.1-2_amd64.deb ... - Unpacking python3-rdkit (202503.1-2) ... - Selecting previously unselected package zlib1g-dev:amd64. - Preparing to unpack .../42-zlib1g-dev_1%3a1.3.dfsg+really1.3.1-1+b1_amd64.deb ... - Unpacking zlib1g-dev:amd64 (1:1.3.dfsg+really1.3.1-1+b1) ... - Setting up media-types (13.0.0) ... - Setting up libboost-python1.83.0 (1.83.0-4.2) ... - Setting up libpixman-1-0:amd64 (0.44.0-3) ... - Setting up libboost1.83-dev:amd64 (1.83.0-4.2) ... - Setting up libxrender1:amd64 (1:0.9.12-1) ... - Setting up libxcb-render0:amd64 (1.17.0-2+b1) ... - Setting up fonts-freefont-ttf (20211204+svn4273-2) ... - Setting up m4 (1.4.19-8) ... - Setting up libxcb-shm0:amd64 (1.17.0-2+b1) ... - Setting up rdkit-data (202503.1-2) ... - Setting up libboost-serialization1.83.0:amd64 (1.83.0-4.2) ... - Setting up libboost-numpy1.83.0 (1.83.0-4.2) ... - Setting up autotools-dev (20240727.1) ... - Setting up libblas3:amd64 (3.12.1-2) ... - update-alternatives: using /usr/lib/x86_64-linux-gnu/blas/libblas.so.3 to provide /usr/lib/x86_64-linux-gnu/libblas.so.3 (libblas.so.3-x86_64-linux-gnu) in auto mode - Setting up libpkgconf3:amd64 (1.8.1-4) ... - Setting up libboost-iostreams1.83.0:amd64 (1.83.0-4.2) ... - Setting up fonts-dejavu-mono (2.37-8) ... - Setting up libpng16-16t64:amd64 (1.6.47-1.1) ... - Setting up python3-numpy-dev:amd64 (1:2.2.4+ds-1) ... - Setting up fonts-dejavu-core (2.37-8) ... - Setting up pkgconf-bin (1.8.1-4) ... - Setting up libgfortran5:amd64 (14.2.0-19) ... - Setting up autoconf (2.72-3.1) ... - Setting up zlib1g-dev:amd64 (1:1.3.dfsg+really1.3.1-1+b1) ... - Setting up libboost-dev:amd64 (1.83.0.2+b2) ... - Setting up libcoordgen3:amd64 (3.0.2-1+b2) ... - Setting up libinchi1.07 (1.07.3+dfsg-1) ... - Setting up readline-common (8.2-6) ... - Setting up libxml2:amd64 (2.12.7+dfsg+really2.9.14-0.4) ... - Setting up automake (1:1.17-4) ... - update-alternatives: using /usr/bin/automake-1.17 to provide /usr/bin/automake (automake) in auto mode - Setting up liblapack3:amd64 (3.12.1-2) ... - update-alternatives: using /usr/lib/x86_64-linux-gnu/lapack/liblapack.so.3 to provide /usr/lib/x86_64-linux-gnu/liblapack.so.3 (liblapack.so.3-x86_64-linux-gnu) in auto mode - Setting up fontconfig-config (2.15.0-2.3) ... - Setting up pkgconf:amd64 (1.8.1-4) ... - Setting up libmaeparser1:amd64 (1.3.1-1+b2) ... - Setting up libfreetype6:amd64 (2.13.3+dfsg-1) ... - Setting up pkg-config:amd64 (1.8.1-4) ... - Setting up libreadline8t64:amd64 (8.2-6) ... - Setting up libfontconfig1:amd64 (2.15.0-2.3) ... - Setting up libpython3.13-stdlib:amd64 (3.13.3-2) ... - Setting up libpython3-stdlib:amd64 (3.13.3-1) ... - Setting up python3.13 (3.13.3-2) ... - Setting up python3 (3.13.3-1) ... - running python rtupdate hooks for python3.13... - running python post-rtupdate hooks for python3.13... - Setting up libcairo2:amd64 (1.18.4-1+b1) ... - Setting up python3-numpy (1:2.2.4+ds-1) ... - Setting up librdkit1t64 (202503.1-2) ... - Setting up libopenbabel7 (3.1.1+dfsg-12) ... - Setting up libopenbabel-dev (3.1.1+dfsg-12) ... - Setting up python3-rdkit (202503.1-2) ... - Setting up librdkit-dev (202503.1-2) ... - Processing triggers for libc-bin (2.41-6) ... <><> Processing actions <><><><><><><><><><><><><><><><><><><><><><><><><><><><> Processing 2/103: [batteries.3.9.0: extract] Processing 3/103: [batteries.3.9.0: extract] [bitv.2.0: extract] Processing 4/103: [batteries.3.9.0: extract] [bitv.2.0: extract] [camlp-streams.5.0.1: extract] -> retrieved bitv.2.0 (cached) Processing 4/103: [batteries.3.9.0: extract] [camlp-streams.5.0.1: extract] Processing 5/103: [batteries.3.9.0: extract] [camlp-streams.5.0.1: extract] [camlzip.1.13: extract] Processing 6/103: [batteries.3.9.0: extract] [camlp-streams.5.0.1: extract] [camlzip.1.13: extract] [bitv: dune build] -> retrieved camlp-streams.5.0.1 (cached) Processing 6/103: [batteries.3.9.0: extract] [camlzip.1.13: extract] [bitv: dune build] Processing 7/103: [batteries.3.9.0: extract] [camlzip.1.13: extract] [bitv: dune build] Processing 8/103: [batteries.3.9.0: extract] [camlzip.1.13: extract] [bitv: dune build] Processing 9/103: [batteries.3.9.0: extract] [camlzip.1.13: extract] [bitv: dune build] Processing 10/103: [batteries.3.9.0: extract] [camlzip.1.13: extract] [bitv: dune build] -> retrieved conf-python-3.9.0.0 (cached) Processing 11/103: [batteries.3.9.0: extract] [camlzip.1.13: extract] [bitv: dune build] -> retrieved conf-rdkit.1 (cached) Processing 12/103: [batteries.3.9.0: extract] [camlzip.1.13: extract] [bitv: dune build] Processing 13/103: [batteries.3.9.0: extract] [camlzip.1.13: extract] [bitv: dune build] Processing 14/103: [batteries.3.9.0: extract] [camlzip.1.13: extract] [cpm.12.2.0: extract] [bitv: dune build] Processing 15/103: [batteries.3.9.0: extract] [camlzip.1.13: extract] [cpm.12.2.0: extract] [bitv: dune build] [camlp-streams: dune build] Processing 16/103: [batteries.3.9.0: extract] [camlzip.1.13: extract] [cpm.12.2.0: extract] [bitv: dune build] [camlp-streams: dune build] [conf-autoconf: autoconf] Processing 17/103: [batteries.3.9.0: extract] [camlzip.1.13: extract] [cpm.12.2.0: extract] [bitv: dune build] [camlp-streams: dune build] [conf-autoconf: autoconf] Processing 18/103: [batteries.3.9.0: extract] [camlzip.1.13: extract] [cpm.12.2.0: extract] [bitv: dune build] [camlp-streams: dune build] [conf-autoconf: autoconf] [conf-pkg-config: pkg-config] Processing 19/103: [batteries.3.9.0: extract] [camlzip.1.13: extract] [cpm.12.2.0: extract] [bitv: dune build] [camlp-streams: dune build] [conf-autoconf: autoconf] [conf-pkg-config: pkg-config] [conf-python-3: python3 test.py] Processing 20/103: [batteries.3.9.0: extract] [camlzip.1.13: extract] [cpm.12.2.0: extract] [bitv: dune build] [camlp-streams: dune build] [conf-autoconf: autoconf] [conf-pkg-config: pkg-config] [conf-python-3: python3 test.py] [conf-rdkit: sh] -> installed conf-boost.1 Processing 21/103: [batteries.3.9.0: extract] [camlzip.1.13: extract] [cpm.12.2.0: extract] [bitv: dune build] [camlp-streams: dune build] [conf-autoconf: autoconf] [conf-pkg-config: pkg-config] [conf-python-3: python3 test.py] [conf-rdkit: sh] -> retrieved batteries.3.9.0 (cached) Processing 21/103: [camlzip.1.13: extract] [cpm.12.2.0: extract] [bitv: dune build] [camlp-streams: dune build] [conf-autoconf: autoconf] [conf-pkg-config: pkg-config] [conf-python-3: python3 test.py] [conf-rdkit: sh] Processing 22/103: [camlzip.1.13: extract] [cpm.12.2.0: extract] [cpu.2.0.0: extract] [bitv: dune build] [camlp-streams: dune build] [conf-autoconf: autoconf] [conf-pkg-config: pkg-config] [conf-python-3: python3 test.py] [conf-rdkit: sh] -> retrieved camlzip.1.13 (cached) Processing 22/103: [cpm.12.2.0: extract] [cpu.2.0.0: extract] [bitv: dune build] [camlp-streams: dune build] [conf-autoconf: autoconf] [conf-pkg-config: pkg-config] [conf-python-3: python3 test.py] [conf-rdkit: sh] Processing 23/103: [cpm.12.2.0: extract] [cpu.2.0.0: extract] [csexp.1.5.2: extract] [bitv: dune build] [camlp-streams: dune build] [conf-autoconf: autoconf] [conf-pkg-config: pkg-config] [conf-python-3: python3 test.py] [conf-rdkit: sh] -> retrieved cpm.12.2.0 (cached) Processing 23/103: [cpu.2.0.0: extract] [csexp.1.5.2: extract] [bitv: dune build] [camlp-streams: dune build] [conf-autoconf: autoconf] [conf-pkg-config: pkg-config] [conf-python-3: python3 test.py] [conf-rdkit: sh] Processing 24/103: [cpu.2.0.0: extract] [csexp.1.5.2: extract] [dokeysto.4.0.1: extract] [bitv: dune build] [camlp-streams: dune build] [conf-autoconf: autoconf] [conf-pkg-config: pkg-config] [conf-python-3: python3 test.py] [conf-rdkit: sh] + /home/opam/.opam/opam-init/hooks/sandbox.sh "build" "autoconf" "-V" (CWD=/home/opam/.opam/5.3-opam/.opam-switch/build/conf-autoconf.0.2) - autoconf (GNU Autoconf) 2.72 - Copyright (C) 2023 Free Software Foundation, Inc. - License GPLv3+/Autoconf: GNU GPL version 3 or later - <https://gnu.org/licenses/gpl.html>, <https://gnu.org/licenses/exceptions.html> - This is free software: you are free to change and redistribute it. - There is NO WARRANTY, to the extent permitted by law. - - Written by David J. MacKenzie and Akim Demaille. -> compiled conf-autoconf.0.2 Processing 24/103: [cpu.2.0.0: extract] [csexp.1.5.2: extract] [dokeysto.4.0.1: extract] [bitv: dune build] [camlp-streams: dune build] [conf-pkg-config: pkg-config] [conf-python-3: python3 test.py] [conf-rdkit: sh] -> installed conf-autoconf.0.2 Processing 25/103: [cpu.2.0.0: extract] [csexp.1.5.2: extract] [dokeysto.4.0.1: extract] [bitv: dune build] [camlp-streams: dune build] [conf-pkg-config: pkg-config] [conf-python-3: python3 test.py] [conf-rdkit: sh] + /home/opam/.opam/opam-init/hooks/sandbox.sh "build" "pkg-config" "--help" (CWD=/home/opam/.opam/5.3-opam/.opam-switch/build/conf-pkg-config.4) - usage: pkgconf [OPTIONS] [LIBRARIES] - - basic options: - - --help this message - --about print pkgconf version and license to stdout - --version print supported pkg-config version to stdout - --atleast-pkgconfig-version check whether or not pkgconf is compatible - with a specified pkg-config version - --errors-to-stdout print all errors on stdout instead of stderr - --print-errors ensure all errors are printed - --short-errors be less verbose about some errors - --silence-errors explicitly be silent about errors - --list-all list all known packages - --list-package-names list all known package names - --simulate simulate walking the calculated dependency graph - --no-cache do not cache already seen packages when - walking the dependency graph - --log-file=filename write an audit log to a specified file - --with-path=path adds a directory to the search path - --define-prefix override the prefix variable with one that is guessed based on - the location of the .pc file - --dont-define-prefix do not override the prefix variable under any circumstances - --prefix-variable=varname sets the name of the variable that pkgconf considers - to be the package prefix - --relocate=path relocates a path and exits (mostly for testsuite) - --dont-relocate-paths disables path relocation support - - cross-compilation personality support: - - --personality=triplet|filename sets the personality to 'triplet' or a file named 'filename' - --dump-personality dumps details concerning selected personality - - checking specific pkg-config database entries: - - --atleast-version require a specific version of a module - --exact-version require an exact version of a module - --max-version require a maximum version of a module - --exists check whether or not a module exists - --uninstalled check whether or not an uninstalled module will be used - --no-uninstalled never use uninstalled modules when satisfying dependencies - --no-provides do not use 'provides' rules to resolve dependencies - --maximum-traverse-depth maximum allowed depth for dependency graph - --static be more aggressive when computing dependency graph - (for static linking) - --shared use a simplified dependency graph (usually default) - --pure optimize a static dependency graph as if it were a normal - dependency graph - --env-only look only for package entries in PKG_CONFIG_PATH - --ignore-conflicts ignore 'conflicts' rules in modules - --validate validate specific .pc files for correctness - - querying specific pkg-config database fields: - - --define-variable=varname=value define variable 'varname' as 'value' - --variable=varname print specified variable entry to stdout - --cflags print required CFLAGS to stdout - --cflags-only-I print required include-dir CFLAGS to stdout - --cflags-only-other print required non-include-dir CFLAGS to stdout - --libs print required linker flags to stdout - --libs-only-L print required LDPATH linker flags to stdout - --libs-only-l print required LIBNAME linker flags to stdout - --libs-only-other print required other linker flags to stdout - --print-requires print required dependency frameworks to stdout - --print-requires-private print required dependency frameworks for static - linking to stdout - --print-provides print provided dependencies to stdout - --print-variables print all known variables in module to stdout - --digraph print entire dependency graph in graphviz 'dot' format - --keep-system-cflags keep -I/usr/include entries in cflags output - --keep-system-libs keep -L/lib:/lib/i386-linux-gnu:/lib/x86_64-linux-gnu:/lib/x86_64-linux-gnux32:/lib32:/libx32:/usr/lib:/usr/lib/i386-linux-gnu:/usr/lib/x86_64-linux-gnu:/usr/lib/x86_64-linux-gnux32:/usr/lib32:/usr/libx32 entries in libs output - --path show the exact filenames for any matching .pc files - --modversion print the specified module's version to stdout - --internal-cflags do not filter 'internal' cflags from output - - filtering output: - - --msvc-syntax print translatable fragments in MSVC syntax - --fragment-filter=types filter output fragments to the specified types - - report bugs to <https://github.com/pkgconf/pkgconf/issues/new>. -> compiled conf-pkg-config.4 Processing 25/103: [cpu.2.0.0: extract] [csexp.1.5.2: extract] [dokeysto.4.0.1: extract] [bitv: dune build] [camlp-streams: dune build] [conf-python-3: python3 test.py] [conf-rdkit: sh] -> installed conf-pkg-config.4 Processing 26/103: [cpu.2.0.0: extract] [csexp.1.5.2: extract] [dokeysto.4.0.1: extract] [bitv: dune build] [camlp-streams: dune build] [conf-python-3: python3 test.py] [conf-rdkit: sh] Processing 27/103: [cpu.2.0.0: extract] [csexp.1.5.2: extract] [dokeysto.4.0.1: extract] [bitv: dune build] [camlp-streams: dune build] [conf-openbabel: sh pkg-config openbabel-2.0 || pkg-config openbabel-3] [conf-python-3: python3 test.py] [conf-rdkit: sh] Processing 28/103: [cpu.2.0.0: extract] [csexp.1.5.2: extract] [dokeysto.4.0.1: extract] [bitv: dune build] [camlp-streams: dune build] [conf-openbabel: sh pkg-config openbabel-2.0 || pkg-config openbabel-3] [conf-python-3: python3 test.py] [conf-rdkit: sh] [conf-zlib: pkg-config zlib] + /home/opam/.opam/opam-init/hooks/sandbox.sh "build" "python3" "test.py" (CWD=/home/opam/.opam/5.3-opam/.opam-switch/build/conf-python-3.9.0.0) - python-3 OK -> compiled conf-python-3.9.0.0 Processing 28/103: [cpu.2.0.0: extract] [csexp.1.5.2: extract] [dokeysto.4.0.1: extract] [bitv: dune build] [camlp-streams: dune build] [conf-openbabel: sh pkg-config openbabel-2.0 || pkg-config openbabel-3] [conf-rdkit: sh] [conf-zlib: pkg-config zlib] -> installed conf-python-3.9.0.0 Processing 29/103: [cpu.2.0.0: extract] [csexp.1.5.2: extract] [dokeysto.4.0.1: extract] [bitv: dune build] [camlp-streams: dune build] [conf-openbabel: sh pkg-config openbabel-2.0 || pkg-config openbabel-3] [conf-rdkit: sh] [conf-zlib: pkg-config zlib] + /home/opam/.opam/opam-init/hooks/sandbox.sh "build" "sh" "-c" "c++ test.cpp -o test -I/usr/include/rdkit -lRDKitRDGeneral -DSWIG || c++ test.cpp -o test -I/usr/include/rdkit -lRDGeneral -DSWIG" (CWD=/home/opam/.opam/5.3-opam/.opam-switch/build/conf-rdkit.1) Processing 29/103: [cpu.2.0.0: extract] [csexp.1.5.2: extract] [dokeysto.4.0.1: extract] [bitv: dune build] [camlp-streams: dune build] [conf-openbabel: sh pkg-config openbabel-2.0 || pkg-config openbabel-3] [conf-rdkit: ./test] [conf-zlib: pkg-config zlib] -> retrieved cpu.2.0.0 (cached) Processing 29/103: [csexp.1.5.2: extract] [dokeysto.4.0.1: extract] [bitv: dune build] [camlp-streams: dune build] [conf-openbabel: sh pkg-config openbabel-2.0 || pkg-config openbabel-3] [conf-rdkit: ./test] [conf-zlib: pkg-config zlib] Processing 30/103: [csexp.1.5.2: extract] [dokeysto.4.0.1: extract] [dolog.6.0.0: extract] [bitv: dune build] [camlp-streams: dune build] [conf-openbabel: sh pkg-config openbabel-2.0 || pkg-config openbabel-3] [conf-rdkit: ./test] [conf-zlib: pkg-config zlib] Processing 31/103: [csexp.1.5.2: extract] [dokeysto.4.0.1: extract] [dolog.6.0.0: extract] [bitv: dune build] [camlp-streams: dune build] [conf-openbabel: sh pkg-config openbabel-2.0 || pkg-config openbabel-3] [conf-rdkit: ./test] [conf-zlib: pkg-config zlib] [cpu: autoconf] -> retrieved csexp.1.5.2 (cached) Processing 31/103: [dokeysto.4.0.1: extract] [dolog.6.0.0: extract] [bitv: dune build] [camlp-streams: dune build] [conf-openbabel: sh pkg-config openbabel-2.0 || pkg-config openbabel-3] [conf-rdkit: ./test] [conf-zlib: pkg-config zlib] [cpu: autoconf] Processing 32/103: [dokeysto.4.0.1: extract] [dolog.6.0.0: extract] [dune-configurator.3.18.1: extract] [bitv: dune build] [camlp-streams: dune build] [conf-openbabel: sh pkg-config openbabel-2.0 || pkg-config openbabel-3] [conf-rdkit: ./test] [conf-zlib: pkg-config zlib] [cpu: autoconf] Processing 33/103: [dokeysto.4.0.1: extract] [dolog.6.0.0: extract] [dune-configurator.3.18.1: extract] [bitv: dune build] [camlp-streams: dune build] [conf-openbabel: sh pkg-config openbabel-2.0 || pkg-config openbabel-3] [conf-rdkit: ./test] [conf-zlib: pkg-config zlib] [cpu: autoconf] [csexp: dune build] -> retrieved dokeysto.4.0.1 (cached) Processing 33/103: [dolog.6.0.0: extract] [dune-configurator.3.18.1: extract] [bitv: dune build] [camlp-streams: dune build] [conf-openbabel: sh pkg-config openbabel-2.0 || pkg-config openbabel-3] [conf-rdkit: ./test] [conf-zlib: pkg-config zlib] [cpu: autoconf] [csexp: dune build] Processing 34/103: [dolog.6.0.0: extract] [dune-configurator.3.18.1: extract] [extunix.0.4.4: extract] [bitv: dune build] [camlp-streams: dune build] [conf-openbabel: sh pkg-config openbabel-2.0 || pkg-config openbabel-3] [conf-rdkit: ./test] [conf-zlib: pkg-config zlib] [cpu: autoconf] [csexp: dune build] + /home/opam/.opam/opam-init/hooks/sandbox.sh "build" "sh" "-c" "pkg-config openbabel-2.0 || pkg-config openbabel-3" (CWD=/home/opam/.opam/5.3-opam/.opam-switch/build/conf-openbabel.0.1) -> compiled conf-openbabel.0.1 Processing 34/103: [dolog.6.0.0: extract] [dune-configurator.3.18.1: extract] [extunix.0.4.4: extract] [bitv: dune build] [camlp-streams: dune build] [conf-rdkit: ./test] [conf-zlib: pkg-config zlib] [cpu: autoconf] [csexp: dune build] -> installed conf-openbabel.0.1 Processing 35/103: [dolog.6.0.0: extract] [dune-configurator.3.18.1: extract] [extunix.0.4.4: extract] [bitv: dune build] [camlp-streams: dune build] [conf-rdkit: ./test] [conf-zlib: pkg-config zlib] [cpu: autoconf] [csexp: dune build] + /home/opam/.opam/opam-init/hooks/sandbox.sh "build" "pkg-config" "zlib" (CWD=/home/opam/.opam/5.3-opam/.opam-switch/build/conf-zlib.1) -> compiled conf-zlib.1 Processing 35/103: [dolog.6.0.0: extract] [dune-configurator.3.18.1: extract] [extunix.0.4.4: extract] [bitv: dune build] [camlp-streams: dune build] [conf-rdkit: ./test] [cpu: autoconf] [csexp: dune build] -> installed conf-zlib.1 Processing 36/103: [dolog.6.0.0: extract] [dune-configurator.3.18.1: extract] [extunix.0.4.4: extract] [bitv: dune build] [camlp-streams: dune build] [conf-rdkit: ./test] [cpu: autoconf] [csexp: dune build] + /home/opam/.opam/opam-init/hooks/sandbox.sh "build" "./test" (CWD=/home/opam/.opam/5.3-opam/.opam-switch/build/conf-rdkit.1) - 2025.03.1 -> compiled conf-rdkit.1 Processing 36/103: [dolog.6.0.0: extract] [dune-configurator.3.18.1: extract] [extunix.0.4.4: extract] [bitv: dune build] [camlp-streams: dune build] [cpu: autoconf] [csexp: dune build] -> installed conf-rdkit.1 Processing 37/103: [dolog.6.0.0: extract] [dune-configurator.3.18.1: extract] [extunix.0.4.4: extract] [bitv: dune build] [camlp-streams: dune build] [cpu: autoconf] [csexp: dune build] -> retrieved dolog.6.0.0 (cached) Processing 37/103: [dune-configurator.3.18.1: extract] [extunix.0.4.4: extract] [bitv: dune build] [camlp-streams: dune build] [cpu: autoconf] [csexp: dune build] Processing 38/103: [dune-configurator.3.18.1: extract] [extunix.0.4.4: extract] [lbvs_consent.2.2.0: extract] [bitv: dune build] [camlp-streams: dune build] [cpu: autoconf] [csexp: dune build] Processing 39/103: [dune-configurator.3.18.1: extract] [extunix.0.4.4: extract] [lbvs_consent.2.2.0: extract] [bitv: dune build] [camlp-streams: dune build] [cpu: autoconf] [csexp: dune build] [dolog: dune build] -> retrieved extunix.0.4.4 (cached) Processing 39/103: [dune-configurator.3.18.1: extract] [lbvs_consent.2.2.0: extract] [bitv: dune build] [camlp-streams: dune build] [cpu: autoconf] [csexp: dune build] [dolog: dune build] Processing 40/103: [dune-configurator.3.18.1: extract] [lbvs_consent.2.2.0: extract] [minicli.5.0.2: extract] [bitv: dune build] [camlp-streams: dune build] [cpu: autoconf] [csexp: dune build] [dolog: dune build] -> retrieved lbvs_consent.2.2.0 (cached) Processing 40/103: [dune-configurator.3.18.1: extract] [minicli.5.0.2: extract] [bitv: dune build] [camlp-streams: dune build] [cpu: autoconf] [csexp: dune build] [dolog: dune build] Processing 41/103: [dune-configurator.3.18.1: extract] [minicli.5.0.2: extract] [num.1.5-1: extract] [bitv: dune build] [camlp-streams: dune build] [cpu: autoconf] [csexp: dune build] [dolog: dune build] -> retrieved minicli.5.0.2 (cached) Processing 41/103: [dune-configurator.3.18.1: extract] [num.1.5-1: extract] [bitv: dune build] [camlp-streams: dune build] [cpu: autoconf] [csexp: dune build] [dolog: dune build] Processing 42/103: [dune-configurator.3.18.1: extract] [num.1.5-1: extract] [ocaml-compiler-libs.v0.17.0: extract] [bitv: dune build] [camlp-streams: dune build] [cpu: autoconf] [csexp: dune build] [dolog: dune build] Processing 43/103: [dune-configurator.3.18.1: extract] [num.1.5-1: extract] [ocaml-compiler-libs.v0.17.0: extract] [bitv: dune build] [camlp-streams: dune build] [cpu: autoconf] [csexp: dune build] [dolog: dune build] [minicli: dune build] -> retrieved num.1.5-1 (cached) Processing 43/103: [dune-configurator.3.18.1: extract] [ocaml-compiler-libs.v0.17.0: extract] [bitv: dune build] [camlp-streams: dune build] [cpu: autoconf] [csexp: dune build] [dolog: dune build] [minicli: dune build] Processing 44/103: [dune-configurator.3.18.1: extract] [ocaml-compiler-libs.v0.17.0: extract] [ocamlfind.1.9.8: extract] [bitv: dune build] [camlp-streams: dune build] [cpu: autoconf] [csexp: dune build] [dolog: dune build] [minicli: dune build] [num: patch] applying num-in-findlib-dir.patch Processing 45/103: [dune-configurator.3.18.1: extract] [ocaml-compiler-libs.v0.17.0: extract] [ocamlfind.1.9.8: extract] [bitv: dune build] [camlp-streams: dune build] [cpu: autoconf] [csexp: dune build] [dolog: dune build] [minicli: dune build] [num: patch] -> retrieved ocaml-compiler-libs.v0.17.0 (cached) Processing 45/103: [dune-configurator.3.18.1: extract] [ocamlfind.1.9.8: extract] [bitv: dune build] [camlp-streams: dune build] [cpu: autoconf] [csexp: dune build] [dolog: dune build] [minicli: dune build] [num: patch] Processing 46/103: [dune-configurator.3.18.1: extract] [ocamlfind.1.9.8: extract] [ounit2.2.2.7: extract] [bitv: dune build] [camlp-streams: dune build] [cpu: autoconf] [csexp: dune build] [dolog: dune build] [minicli: dune build] [num: patch] Processing 47/103: [dune-configurator.3.18.1: extract] [ocamlfind.1.9.8: extract] [ounit2.2.2.7: extract] [bitv: dune build] [camlp-streams: dune build] [cpu: autoconf] [csexp: dune build] [dolog: dune build] [minicli: dune build] [num: patch] [ocaml-compiler-libs: dune build] -> retrieved ocamlfind.1.9.8 (cached) Processing 47/103: [dune-configurator.3.18.1: extract] [ounit2.2.2.7: extract] [bitv: dune build] [camlp-streams: dune build] [cpu: autoconf] [csexp: dune build] [dolog: dune build] [minicli: dune build] [num: patch] [ocaml-compiler-libs: dune build] Processing 48/103: [dune-configurator.3.18.1: extract] [ounit2.2.2.7: extract] [parany.14.0.1: extract] [bitv: dune build] [camlp-streams: dune build] [cpu: autoconf] [csexp: dune build] [dolog: dune build] [minicli: dune build] [num: patch] [ocaml-compiler-libs: dune build] Processing 49/103: [dune-configurator.3.18.1: extract] [ounit2.2.2.7: extract] [parany.14.0.1: extract] [bitv: dune build] [camlp-streams: dune build] [cpu: autoconf] [csexp: dune build] [dolog: dune build] [minicli: dune build] [num: patch] [ocaml-compiler-libs: dune build] [ocamlfind: ./configure] + /home/opam/.opam/opam-init/hooks/sandbox.sh "build" "dune" "build" "-p" "bitv" "-j" "39" (CWD=/home/opam/.opam/5.3-opam/.opam-switch/build/bitv.2.0) -> compiled bitv.2.0 Processing 49/103: [dune-configurator.3.18.1: extract] [ounit2.2.2.7: extract] [parany.14.0.1: extract] [camlp-streams: dune build] [cpu: autoconf] [csexp: dune build] [dolog: dune build] [minicli: dune build] [num: patch] [ocaml-compiler-libs: dune build] [ocamlfind: ./configure] -> installed bitv.2.0 Processing 50/103: [dune-configurator.3.18.1: extract] [ounit2.2.2.7: extract] [parany.14.0.1: extract] [camlp-streams: dune build] [cpu: autoconf] [csexp: dune build] [dolog: dune build] [minicli: dune build] [num: patch] [ocaml-compiler-libs: dune build] [ocamlfind: ./configure] Processing 50/103: [dune-configurator.3.18.1: extract] [ounit2.2.2.7: extract] [parany.14.0.1: extract] [camlp-streams: dune build] [cpu: autoconf] [csexp: dune build] [dolog: dune build] [minicli: dune build] [num: make opam-modern] [ocaml-compiler-libs: dune build] [ocamlfind: ./configure] -> retrieved ounit2.2.2.7 (cached) Processing 50/103: [dune-configurator.3.18.1: extract] [parany.14.0.1: extract] [camlp-streams: dune build] [cpu: autoconf] [csexp: dune build] [dolog: dune build] [minicli: dune build] [num: make opam-modern] [ocaml-compiler-libs: dune build] [ocamlfind: ./configure] Processing 51/103: [dune-configurator.3.18.1: extract] [parany.14.0.1: extract] [ppx_derivers.1.2.1: extract] [camlp-streams: dune build] [cpu: autoconf] [csexp: dune build] [dolog: dune build] [minicli: dune build] [num: make opam-modern] [ocaml-compiler-libs: dune build] [ocamlfind: ./configure] -> retrieved parany.14.0.1 (cached) Processing 51/103: [dune-configurator.3.18.1: extract] [ppx_derivers.1.2.1: extract] [camlp-streams: dune build] [cpu: autoconf] [csexp: dune build] [dolog: dune build] [minicli: dune build] [num: make opam-modern] [ocaml-compiler-libs: dune build] [ocamlfind: ./configure] Processing 52/103: [dune-configurator.3.18.1: extract] [ppx_derivers.1.2.1: extract] [ppxlib.0.36.0: extract] [camlp-streams: dune build] [cpu: autoconf] [csexp: dune build] [dolog: dune build] [minicli: dune build] [num: make opam-modern] [ocaml-compiler-libs: dune build] [ocamlfind: ./configure] -> retrieved ppx_derivers.1.2.1 (cached) Processing 52/103: [dune-configurator.3.18.1: extract] [ppxlib.0.36.0: extract] [camlp-streams: dune build] [cpu: autoconf] [csexp: dune build] [dolog: dune build] [minicli: dune build] [num: make opam-modern] [ocaml-compiler-libs: dune build] [ocamlfind: ./configure] Processing 53/103: [dune-configurator.3.18.1: extract] [ppxlib.0.36.0: extract] [qcheck.0.25 + 2 others: extract] [camlp-streams: dune build] [cpu: autoconf] [csexp: dune build] [dolog: dune build] [minicli: dune build] [num: make opam-modern] [ocaml-compiler-libs: dune build] [ocamlfind: ./configure] Processing 54/103: [dune-configurator.3.18.1: extract] [ppxlib.0.36.0: extract] [qcheck.0.25 + 2 others: extract] [camlp-streams: dune build] [cpu: autoconf] [csexp: dune build] [dolog: dune build] [minicli: dune build] [num: make opam-modern] [ocaml-compiler-libs: dune build] [ocamlfind: ./configure] [ppx_derivers: dune build] -> retrieved qcheck.0.25, qcheck-core.0.25, qcheck-ounit.0.25 (cached) Processing 54/103: [dune-configurator.3.18.1: extract] [ppxlib.0.36.0: extract] [camlp-streams: dune build] [cpu: autoconf] [csexp: dune build] [dolog: dune build] [minicli: dune build] [num: make opam-modern] [ocaml-compiler-libs: dune build] [ocamlfind: ./configure] [ppx_derivers: dune build] -> retrieved seq.base (cached) Processing 55/103: [dune-configurator.3.18.1: extract] [ppxlib.0.36.0: extract] [camlp-streams: dune build] [cpu: autoconf] [csexp: dune build] [dolog: dune build] [minicli: dune build] [num: make opam-modern] [ocaml-compiler-libs: dune build] [ocamlfind: ./configure] [ppx_derivers: dune build] Processing 56/103: [dune-configurator.3.18.1: extract] [ppxlib.0.36.0: extract] [sexplib0.v0.17.0: extract] [camlp-streams: dune build] [cpu: autoconf] [csexp: dune build] [dolog: dune build] [minicli: dune build] [num: make opam-modern] [ocaml-compiler-libs: dune build] [ocamlfind: ./configure] [ppx_derivers: dune build] Processing 57/103: [dune-configurator.3.18.1: extract] [ppxlib.0.36.0: extract] [sexplib0.v0.17.0: extract] [camlp-streams: dune build] [cpu: autoconf] [csexp: dune build] [dolog: dune build] [minicli: dune build] [num: make opam-modern] [ocaml-compiler-libs: dune build] [ocamlfind: ./configure] [ppx_derivers: dune build] [qcheck-core: dune build] Processing 58/103: [dune-configurator.3.18.1: extract] [ppxlib.0.36.0: extract] [sexplib0.v0.17.0: extract] [camlp-streams: dune build] [cpu: autoconf] [csexp: dune build] [dolog: dune build] [minicli: dune build] [num: make opam-modern] [ocaml-compiler-libs: dune build] [ocamlfind: ./configure] [ppx_derivers: dune build] [qcheck-core: dune build] -> installed seq.base Processing 59/103: [dune-configurator.3.18.1: extract] [ppxlib.0.36.0: extract] [sexplib0.v0.17.0: extract] [camlp-streams: dune build] [cpu: autoconf] [csexp: dune build] [dolog: dune build] [minicli: dune build] [num: make opam-modern] [ocaml-compiler-libs: dune build] [ocamlfind: ./configure] [ppx_derivers: dune build] [qcheck-core: dune build] + /home/opam/.opam/opam-init/hooks/sandbox.sh "build" "dune" "build" "-p" "csexp" "-j" "39" "@install" (CWD=/home/opam/.opam/5.3-opam/.opam-switch/build/csexp.1.5.2) - (cd _build/default && /home/opam/.opam/5.3-opam/bin/ocamlc.opt -w -40 -g -bin-annot -bin-annot-occurrences -I src/.csexp.objs/byte -intf-suffix .ml -no-alias-deps -o src/.csexp.objs/byte/csexp.cmo -c -impl src/csexp.ml) - File "src/csexp.ml", line 236, characters 7-14: - 236 | [@@inlined always] - ^^^^^^^ - Warning 53 [misplaced-attribute]: the "inlined" attribute cannot appear in this context - (cd _build/default && /home/opam/.opam/5.3-opam/bin/ocamlopt.opt -w -40 -g -I src/.csexp.objs/byte -I src/.csexp.objs/native -intf-suffix .ml -no-alias-deps -o src/.csexp.objs/native/csexp.cmx -c -impl src/csexp.ml) - File "src/csexp.ml", line 236, characters 7-14: - 236 | [@@inlined always] - ^^^^^^^ - Warning 53 [misplaced-attribute]: the "inlined" attribute cannot appear in this context -> compiled csexp.1.5.2 Processing 59/103: [dune-configurator.3.18.1: extract] [ppxlib.0.36.0: extract] [sexplib0.v0.17.0: extract] [camlp-streams: dune build] [cpu: autoconf] [dolog: dune build] [minicli: dune build] [num: make opam-modern] [ocaml-compiler-libs: dune build] [ocamlfind: ./configure] [ppx_derivers: dune build] [qcheck-core: dune build] -> installed csexp.1.5.2 Processing 60/103: [dune-configurator.3.18.1: extract] [ppxlib.0.36.0: extract] [sexplib0.v0.17.0: extract] [camlp-streams: dune build] [cpu: autoconf] [dolog: dune build] [minicli: dune build] [num: make opam-modern] [ocaml-compiler-libs: dune build] [ocamlfind: ./configure] [ppx_derivers: dune build] [qcheck-core: dune build] -> retrieved sexplib0.v0.17.0 (cached) Processing 60/103: [dune-configurator.3.18.1: extract] [ppxlib.0.36.0: extract] [camlp-streams: dune build] [cpu: autoconf] [dolog: dune build] [minicli: dune build] [num: make opam-modern] [ocaml-compiler-libs: dune build] [ocamlfind: ./configure] [ppx_derivers: dune build] [qcheck-core: dune build] Processing 61/103: [dune-configurator.3.18.1: extract] [ppxlib.0.36.0: extract] [stdlib-shims.0.3.0: extract] [camlp-streams: dune build] [cpu: autoconf] [dolog: dune build] [minicli: dune build] [num: make opam-modern] [ocaml-compiler-libs: dune build] [ocamlfind: ./configure] [ppx_derivers: dune build] [qcheck-core: dune build] Processing 62/103: [dune-configurator.3.18.1: extract] [ppxlib.0.36.0: extract] [stdlib-shims.0.3.0: extract] [camlp-streams: dune build] [cpu: autoconf] [dolog: dune build] [minicli: dune build] [num: make opam-modern] [ocaml-compiler-libs: dune build] [ocamlfind: ./configure] [ppx_derivers: dune build] [qcheck-core: dune build] [sexplib0: dune build] -> retrieved stdlib-shims.0.3.0 (cached) Processing 62/103: [dune-configurator.3.18.1: extract] [ppxlib.0.36.0: extract] [camlp-streams: dune build] [cpu: autoconf] [dolog: dune build] [minicli: dune build] [num: make opam-modern] [ocaml-compiler-libs: dune build] [ocamlfind: ./configure] [ppx_derivers: dune build] [qcheck-core: dune build] [sexplib0: dune build] Processing 63/103: [dune-configurator.3.18.1: extract] [ppxlib.0.36.0: extract] [vpt.5.0.0: extract] [camlp-streams: dune build] [cpu: autoconf] [dolog: dune build] [minicli: dune build] [num: make opam-modern] [ocaml-compiler-libs: dune build] [ocamlfind: ./configure] [ppx_derivers: dune build] [qcheck-core: dune build] [sexplib0: dune build] Processing 64/103: [dune-configurator.3.18.1: extract] [ppxlib.0.36.0: extract] [vpt.5.0.0: extract] [camlp-streams: dune build] [cpu: autoconf] [dolog: dune build] [minicli: dune build] [num: make opam-modern] [ocaml-compiler-libs: dune build] [ocamlfind: ./configure] [ppx_derivers: dune build] [qcheck-core: dune build] [sexplib0: dune build] [stdlib-shims: dune build] + /home/opam/.opam/opam-init/hooks/sandbox.sh "build" "dune" "build" "-p" "dolog" "-j" "39" (CWD=/home/opam/.opam/5.3-opam/.opam-switch/build/dolog.6.0.0) -> compiled dolog.6.0.0 Processing 64/103: [dune-configurator.3.18.1: extract] [ppxlib.0.36.0: extract] [vpt.5.0.0: extract] [camlp-streams: dune build] [cpu: autoconf] [minicli: dune build] [num: make opam-modern] [ocaml-compiler-libs: dune build] [ocamlfind: ./configure] [ppx_derivers: dune build] [qcheck-core: dune build] [sexplib0: dune build] [stdlib-shims: dune build] -> installed dolog.6.0.0 Processing 65/103: [dune-configurator.3.18.1: extract] [ppxlib.0.36.0: extract] [vpt.5.0.0: extract] [camlp-streams: dune build] [cpu: autoconf] [minicli: dune build] [num: make opam-modern] [ocaml-compiler-libs: dune build] [ocamlfind: ./configure] [ppx_derivers: dune build] [qcheck-core: dune build] [sexplib0: dune build] [stdlib-shims: dune build] + /home/opam/.opam/opam-init/hooks/sandbox.sh "build" "dune" "build" "-p" "minicli" "-j" "39" (CWD=/home/opam/.opam/5.3-opam/.opam-switch/build/minicli.5.0.2) -> compiled minicli.5.0.2 Processing 65/103: [dune-configurator.3.18.1: extract] [ppxlib.0.36.0: extract] [vpt.5.0.0: extract] [camlp-streams: dune build] [cpu: autoconf] [num: make opam-modern] [ocaml-compiler-libs: dune build] [ocamlfind: ./configure] [ppx_derivers: dune build] [qcheck-core: dune build] [sexplib0: dune build] [stdlib-shims: dune build] -> installed minicli.5.0.2 Processing 66/103: [dune-configurator.3.18.1: extract] [ppxlib.0.36.0: extract] [vpt.5.0.0: extract] [camlp-streams: dune build] [cpu: autoconf] [num: make opam-modern] [ocaml-compiler-libs: dune build] [ocamlfind: ./configure] [ppx_derivers: dune build] [qcheck-core: dune build] [sexplib0: dune build] [stdlib-shims: dune build] + /home/opam/.opam/opam-init/hooks/sandbox.sh "build" "autoconf" (CWD=/home/opam/.opam/5.3-opam/.opam-switch/build/cpu.2.0.0) - configure.ac:8: warning: The macro 'AC_HEADER_STDC' is obsolete. - configure.ac:8: You should run autoupdate. - ./lib/autoconf/headers.m4:663: AC_HEADER_STDC is expanded from... - configure.ac:8: the top level Processing 66/103: [dune-configurator.3.18.1: extract] [ppxlib.0.36.0: extract] [vpt.5.0.0: extract] [camlp-streams: dune build] [cpu: autoheader] [num: make opam-modern] [ocaml-compiler-libs: dune build] [ocamlfind: ./configure] [ppx_derivers: dune build] [qcheck-core: dune build] [sexplib0: dune build] [stdlib-shims: dune build] -> retrieved vpt.5.0.0 (cached) Processing 66/103: [dune-configurator.3.18.1: extract] [ppxlib.0.36.0: extract] [camlp-streams: dune build] [cpu: autoheader] [num: make opam-modern] [ocaml-compiler-libs: dune build] [ocamlfind: ./configure] [ppx_derivers: dune build] [qcheck-core: dune build] [sexplib0: dune build] [stdlib-shims: dune build] Processing 67/103: [dune-configurator.3.18.1: extract] [ppxlib.0.36.0: extract] [camlp-streams: dune build] [cpu: autoheader] [num: make opam-modern] [ocaml-compiler-libs: dune build] [ocamlfind: ./configure] [ppx_derivers: dune build] [qcheck-core: dune build] [sexplib0: dune build] [stdlib-shims: dune build] [vpt: dune build] -> retrieved ppxlib.0.36.0 (cached) Processing 67/103: [dune-configurator.3.18.1: extract] [camlp-streams: dune build] [cpu: autoheader] [num: make opam-modern] [ocaml-compiler-libs: dune build] [ocamlfind: ./configure] [ppx_derivers: dune build] [qcheck-core: dune build] [sexplib0: dune build] [stdlib-shims: dune build] [vpt: dune build] + /home/opam/.opam/opam-init/hooks/sandbox.sh "build" "dune" "build" "-p" "camlp-streams" "-j" "39" "@install" (CWD=/home/opam/.opam/5.3-opam/.opam-switch/build/camlp-streams.5.0.1) -> compiled camlp-streams.5.0.1 Processing 67/103: [dune-configurator.3.18.1: extract] [cpu: autoheader] [num: make opam-modern] [ocaml-compiler-libs: dune build] [ocamlfind: ./configure] [ppx_derivers: dune build] [qcheck-core: dune build] [sexplib0: dune build] [stdlib-shims: dune build] [vpt: dune build] -> installed camlp-streams.5.0.1 Processing 68/103: [dune-configurator.3.18.1: extract] [cpu: autoheader] [num: make opam-modern] [ocaml-compiler-libs: dune build] [ocamlfind: ./configure] [ppx_derivers: dune build] [qcheck-core: dune build] [sexplib0: dune build] [stdlib-shims: dune build] [vpt: dune build] + /home/opam/.opam/opam-init/hooks/sandbox.sh "build" "dune" "build" "-p" "ppx_derivers" "-j" "39" (CWD=/home/opam/.opam/5.3-opam/.opam-switch/build/ppx_derivers.1.2.1) -> compiled ppx_derivers.1.2.1 Processing 68/103: [dune-configurator.3.18.1: extract] [cpu: autoheader] [num: make opam-modern] [ocaml-compiler-libs: dune build] [ocamlfind: ./configure] [qcheck-core: dune build] [sexplib0: dune build] [stdlib-shims: dune build] [vpt: dune build] -> installed ppx_derivers.1.2.1 Processing 69/103: [dune-configurator.3.18.1: extract] [cpu: autoheader] [num: make opam-modern] [ocaml-compiler-libs: dune build] [ocamlfind: ./configure] [qcheck-core: dune build] [sexplib0: dune build] [stdlib-shims: dune build] [vpt: dune build] -> retrieved dune-configurator.3.18.1 (cached) Processing 69/103: [cpu: autoheader] [num: make opam-modern] [ocaml-compiler-libs: dune build] [ocamlfind: ./configure] [qcheck-core: dune build] [sexplib0: dune build] [stdlib-shims: dune build] [vpt: dune build] Processing 70/103: [cpu: autoheader] [dune-configurator: rm] [num: make opam-modern] [ocaml-compiler-libs: dune build] [ocamlfind: ./configure] [qcheck-core: dune build] [sexplib0: dune build] [stdlib-shims: dune build] [vpt: dune build] + /home/opam/.opam/opam-init/hooks/sandbox.sh "build" "dune" "build" "-p" "ocaml-compiler-libs" "-j" "39" (CWD=/home/opam/.opam/5.3-opam/.opam-switch/build/ocaml-compiler-libs.v0.17.0) -> compiled ocaml-compiler-libs.v0.17.0 Processing 70/103: [cpu: autoheader] [dune-configurator: rm] [num: make opam-modern] [ocamlfind: ./configure] [qcheck-core: dune build] [sexplib0: dune build] [stdlib-shims: dune build] [vpt: dune build] -> installed ocaml-compiler-libs.v0.17.0 Processing 71/103: [cpu: autoheader] [dune-configurator: rm] [num: make opam-modern] [ocamlfind: ./configure] [qcheck-core: dune build] [sexplib0: dune build] [stdlib-shims: dune build] [vpt: dune build] + /home/opam/.opam/opam-init/hooks/sandbox.sh "build" "./configure" "-bindir" "/home/opam/.opam/5.3-opam/bin" "-sitelib" "/home/opam/.opam/5.3-opam/lib" "-mandir" "/home/opam/.opam/5.3-opam/man" "-config" "/home/opam/.opam/5.3-opam/lib/findlib.conf" "-no-custom" "-no-camlp4" (CWD=/home/opam/.opam/5.3-opam/.opam-switch/build/ocamlfind.1.9.8) - Welcome to findlib version 1.9.8 - Configuring core... - Checking for #remove_directory... - Testing threading model... - systhread_supported: true - Testing DLLs... - Testing whether ppxopt can be supported... - Checking for ocamlc -opaque... - Checking for ocamlopt -g... - Configuring libraries... - unix: found (in +unix) - dynlink: found (in +dynlink) - bigarray: not present (possible since 4.08) - compiler-libs: found - dbm: not present (normal since 4.00) - graphics: not present (normal since 4.09) - num: not present (normal since 4.06) - ocamlbuild: not present (normal since 4.03) - ocamldoc: found (in +ocamldoc) - raw_spacetime: not present (normal since 4.12) - threads: found (in +threads) - str: found (in +str) - labltk: not present (normal since 4.02) - native dynlink: found - camlp4: disabled - bytes: found, installing fake library - Configuration for bytes written to site-lib-src/bytes/META - Detecting compiler arguments: (extractor built) ok - - About the OCAML core installation: - Standard library: /home/opam/.opam/5.3-opam/lib/ocaml - Binaries: /home/opam/.opam/5.3-opam/bin - Manual pages: /home/opam/.opam/5.3-opam/man - Multi-threading type: posix - The directory of site-specific packages will be - site-lib: /home/opam/.opam/5.3-opam/lib - The configuration file is written to: - findlib config file: /home/opam/.opam/5.3-opam/lib/findlib.conf - Software will be installed: - Libraries: in <site-lib>/findlib - Binaries: /home/opam/.opam/5.3-opam/bin - Manual pages: /home/opam/.opam/5.3-opam/man - topfind script: /home/opam/.opam/5.3-opam/lib/ocaml - Topfind ppxopt support: yes - Toolbox: no - Link custom runtime: no - Need bytes compatibility: no - - Configuration has been written to Makefile.config - - You can now do 'make all', and optionally 'make opt', to build ocamlfind. Processing 71/103: [cpu: autoheader] [dune-configurator: rm] [num: make opam-modern] [ocamlfind: make all] [qcheck-core: dune build] [sexplib0: dune build] [stdlib-shims: dune build] [vpt: dune build] + /home/opam/.opam/opam-init/hooks/sandbox.sh "build" "make" "PROFILE=release" "opam-modern" (CWD=/home/opam/.opam/5.3-opam/.opam-switch/build/num.1.5-1) - make -C src all - make[1]: Entering directory '/home/opam/.opam/5.3-opam/.opam-switch/build/num.1.5-1/src' - ocamlc -ccopt -DBNG_ARCH_amd64 -c bng.c - ocamlc -ccopt -DBNG_ARCH_amd64 -c nat_stubs.c - ocamlmklib -oc nums bng.o nat_stubs.o - ocamlc -w +a-4-9-41-42-44-45-48 -bin-annot -g -safe-string -strict-sequence -strict-formats -I +compiler-libs -c int_misc.mli - ocamlc -w +a-4-9-41-42-44-45-48 -bin-annot -g -safe-string -strict-sequence -strict-formats -I +compiler-libs -c int_misc.ml - ocamlc -w +a-4-9-41-42-44-45-48 -bin-annot -g -safe-string -strict-sequence -strict-formats -I +compiler-libs -c nat.mli - ocamlc -w +a-4-9-41-42-44-45-48 -bin-annot -g -safe-string -strict-sequence -strict-formats -I +compiler-libs -c nat.ml - ocamlc -w +a-4-9-41-42-44-45-48 -bin-annot -g -safe-string -strict-sequence -strict-formats -I +compiler-libs -c big_int.mli - ocamlc -w +a-4-9-41-42-44-45-48 -bin-annot -g -safe-string -strict-sequence -strict-formats -I +compiler-libs -c big_int.ml - ocamlc -w +a-4-9-41-42-44-45-48 -bin-annot -g -safe-string -strict-sequence -strict-formats -I +compiler-libs -c arith_flags.mli - ocamlc -w +a-4-9-41-42-44-45-48 -bin-annot -g -safe-string -strict-sequence -strict-formats -I +compiler-libs -c arith_flags.ml - ocamlc -w +a-4-9-41-42-44-45-48 -bin-annot -g -safe-string -strict-sequence -strict-formats -I +compiler-libs -c ratio.mli - ocamlc -w +a-4-9-41-42-44-45-48 -bin-annot -g -safe-string -strict-sequence -strict-formats -I +compiler-libs -c ratio.ml - ocamlc -w +a-4-9-41-42-44-45-48 -bin-annot -g -safe-string -strict-sequence -strict-formats -I +compiler-libs -c num.mli - ocamlc -w +a-4-9-41-42-44-45-48 -bin-annot -g -safe-string -strict-sequence -strict-formats -I +compiler-libs -c num.ml - ocamlc -w +a-4-9-41-42-44-45-48 -bin-annot -g -safe-string -strict-sequence -strict-formats -I +compiler-libs -c arith_status.mli - ocamlc -w +a-4-9-41-42-44-45-48 -bin-annot -g -safe-string -strict-sequence -strict-formats -I +compiler-libs -c arith_status.ml - ocamlmklib -o nums -oc nums -linkall int_misc.cmo nat.cmo big_int.cmo arith_flags.cmo ratio.cmo num.cmo arith_status.cmo - cp ../toplevel/num_top_printers.mli ../toplevel/num_top.mli ../toplevel/num_top_printers.ml ../toplevel/num_top.ml . - ocamlc -w +a-4-9-41-42-44-45-48 -bin-annot -g -safe-string -strict-sequence -strict-formats -I +compiler-libs -c num_top_printers.mli - ocamlc -w +a-4-9-41-42-44-45-48 -bin-annot -g -safe-string -strict-sequence -strict-formats -I +compiler-libs -c num_top_printers.ml - ocamlc -w +a-4-9-41-42-44-45-48 -bin-annot -g -safe-string -strict-sequence -strict-formats -I +compiler-libs -c num_top.mli - ocamlc -w +a-4-9-41-42-44-45-48 -bin-annot -g -safe-string -strict-sequence -strict-formats -I +compiler-libs -c num_top.ml - ocamlc -w +a-4-9-41-42-44-45-48 -bin-annot -g -safe-string -strict-sequence -strict-formats -I +compiler-libs -a -o num_top.cma num_top_printers.cmo num_top.cmo - echo 'version = "1.6~dev"' > META.top - cat META.num-top.in >> META.top - ocamlopt -w +a-4-9-41-42-44-45-48 -bin-annot -g -safe-string -strict-sequence -strict-formats -I +compiler-libs -c int_misc.ml - ocamlopt -w +a-4-9-41-42-44-45-48 -bin-annot -g -safe-string -strict-sequence -strict-formats -I +compiler-libs -c nat.ml - ocamlopt -w +a-4-9-41-42-44-45-48 -bin-annot -g -safe-string -strict-sequence -strict-formats -I +compiler-libs -c big_int.ml - ocamlopt -w +a-4-9-41-42-44-45-48 -bin-annot -g -safe-string -strict-sequence -strict-formats -I +compiler-libs -c arith_flags.ml - ocamlopt -w +a-4-9-41-42-44-45-48 -bin-annot -g -safe-string -strict-sequence -strict-formats -I +compiler-libs -c ratio.ml - ocamlopt -w +a-4-9-41-42-44-45-48 -bin-annot -g -safe-string -strict-sequence -strict-formats -I +compiler-libs -c num.ml - ocamlopt -w +a-4-9-41-42-44-45-48 -bin-annot -g -safe-string -strict-sequence -strict-formats -I +compiler-libs -c arith_status.ml - ocamlmklib -o nums -oc nums -linkall int_misc.cmx nat.cmx big_int.cmx arith_flags.cmx ratio.cmx num.cmx arith_status.cmx - ocamlopt -w +a-4-9-41-42-44-45-48 -bin-annot -g -safe-string -strict-sequence -strict-formats -I +compiler-libs -I . -shared -o nums.cmxs nums.cmxa - make[1]: Leaving directory '/home/opam/.opam/5.3-opam/.opam-switch/build/num.1.5-1/src' - cp src/num-modern.install num.install -> compiled num.1.5-1 Processing 71/103: [cpu: autoheader] [dune-configurator: rm] [ocamlfind: make all] [qcheck-core: dune build] [sexplib0: dune build] [stdlib-shims: dune build] [vpt: dune build] -> installed num.1.5-1 Processing 72/103: [cpu: autoheader] [dune-configurator: rm] [ocamlfind: make all] [qcheck-core: dune build] [sexplib0: dune build] [stdlib-shims: dune build] [vpt: dune build] + /home/opam/.opam/opam-init/hooks/sandbox.sh "build" "dune" "build" "-p" "qcheck-core" "-j" "39" (CWD=/home/opam/.opam/5.3-opam/.opam-switch/build/qcheck-core.0.25) -> compiled qcheck-core.0.25 Processing 72/103: [cpu: autoheader] [dune-configurator: rm] [ocamlfind: make all] [sexplib0: dune build] [stdlib-shims: dune build] [vpt: dune build] -> installed qcheck-core.0.25 Processing 73/103: [cpu: autoheader] [dune-configurator: rm] [ocamlfind: make all] [sexplib0: dune build] [stdlib-shims: dune build] [vpt: dune build] + /home/opam/.opam/opam-init/hooks/sandbox.sh "build" "dune" "build" "-p" "sexplib0" "-j" "39" (CWD=/home/opam/.opam/5.3-opam/.opam-switch/build/sexplib0.v0.17.0) -> compiled sexplib0.v0.17.0 Processing 73/103: [cpu: autoheader] [dune-configurator: rm] [ocamlfind: make all] [stdlib-shims: dune build] [vpt: dune build] -> installed sexplib0.v0.17.0 Processing 74/103: [cpu: autoheader] [dune-configurator: rm] [ocamlfind: make all] [stdlib-shims: dune build] [vpt: dune build] + /home/opam/.opam/opam-init/hooks/sandbox.sh "build" "dune" "build" "-p" "stdlib-shims" "-j" "39" (CWD=/home/opam/.opam/5.3-opam/.opam-switch/build/stdlib-shims.0.3.0) -> compiled stdlib-shims.0.3.0 Processing 74/103: [cpu: autoheader] [dune-configurator: rm] [ocamlfind: make all] [vpt: dune build] -> installed stdlib-shims.0.3.0 Processing 75/103: [cpu: autoheader] [dune-configurator: rm] [ocamlfind: make all] [vpt: dune build] Processing 76/103: [cpu: autoheader] [dune-configurator: rm] [ocamlfind: make all] [ounit2: dune build] [vpt: dune build] Processing 77/103: [cpu: autoheader] [dune-configurator: rm] [ocamlfind: make all] [ounit2: dune build] [ppxlib: dune build] [vpt: dune build] + /home/opam/.opam/opam-init/hooks/sandbox.sh "build" "autoheader" (CWD=/home/opam/.opam/5.3-opam/.opam-switch/build/cpu.2.0.0) Processing 77/103: [cpu: ./configure] [dune-configurator: rm] [ocamlfind: make all] [ounit2: dune build] [ppxlib: dune build] [vpt: dune build] + /home/opam/.opam/opam-init/hooks/sandbox.sh "build" "dune" "build" "-p" "vpt" "-j" "39" (CWD=/home/opam/.opam/5.3-opam/.opam-switch/build/vpt.5.0.0) -> compiled vpt.5.0.0 Processing 77/103: [cpu: ./configure] [dune-configurator: rm] [ocamlfind: make all] [ounit2: dune build] [ppxlib: dune build] -> installed vpt.5.0.0 Processing 78/103: [cpu: ./configure] [dune-configurator: rm] [ocamlfind: make all] [ounit2: dune build] [ppxlib: dune build] + /home/opam/.opam/opam-init/hooks/sandbox.sh "build" "rm" "-rf" "vendor/csexp" (CWD=/home/opam/.opam/5.3-opam/.opam-switch/build/dune-configurator.3.18.1) + /home/opam/.opam/opam-init/hooks/sandbox.sh "build" "rm" "-rf" "vendor/pp" (CWD=/home/opam/.opam/5.3-opam/.opam-switch/build/dune-configurator.3.18.1) Processing 78/103: [cpu: ./configure] [dune-configurator: dune build] [ocamlfind: make all] [ounit2: dune build] [ppxlib: dune build] + /home/opam/.opam/opam-init/hooks/sandbox.sh "build" "./configure" (CWD=/home/opam/.opam/5.3-opam/.opam-switch/build/cpu.2.0.0) - checking for ocamlc... ocamlc - OCaml version is 5.3.0 - OCaml library path is /home/opam/.opam/5.3-opam/lib/ocaml - checking for ocamlopt... ocamlopt - checking for ocamlc.opt... ocamlc.opt - checking for ocamlopt.opt... ocamlopt.opt - checking for dynlink.cmxa... no - checking for ocaml... ocaml - checking for ocamldep... ocamldep - checking for ocamlmktop... ocamlmktop - checking for ocamlmklib... ocamlmklib - checking for ocamldoc... ocamldoc - checking for ocamlbuild... no - checking for gcc... gcc - checking whether the C compiler works... yes - checking for C compiler default output file name... a.out - checking for suffix of executables... - checking whether we are cross compiling... no - checking for suffix of object files... o - checking whether the compiler supports GNU C... yes - checking whether gcc accepts -g... yes - checking for gcc option to enable C11 features... none needed - checking for stdio.h... yes - checking for stdlib.h... yes - checking for string.h... yes - checking for inttypes.h... yes - checking for stdint.h... yes - checking for strings.h... yes - checking for sys/stat.h... yes - checking for sys/types.h... yes - checking for unistd.h... yes - checking for grep that handles long lines and -e... /usr/bin/grep - checking for egrep... /usr/bin/grep -E - checking for sched.h... yes - checking for gcc options needed to detect all undeclared functions... none needed - checking whether sched_setaffinity is declared... yes - checking for mach/thread_policy.h... no - checking whether thread_policy_set is declared... no - configure: creating ./config.status - config.status: creating src/config.h Processing 78/103: [cpu: dune build] [dune-configurator: dune build] [ocamlfind: make all] [ounit2: dune build] [ppxlib: dune build] + /home/opam/.opam/opam-init/hooks/sandbox.sh "build" "make" "all" (CWD=/home/opam/.opam/5.3-opam/.opam-switch/build/ocamlfind.1.9.8) - for p in findlib; do ( cd src/$p; make all ) || exit; done - make[1]: Entering directory '/home/opam/.opam/5.3-opam/.opam-switch/build/ocamlfind.1.9.8/src/findlib' - ocamllex fl_meta.mll - 22 states, 392 transitions, table size 1700 bytes - USE_CYGPATH="0"; \ - export USE_CYGPATH; \ - cat findlib_config.mlp | \ - ../../tools/patch '@CONFIGFILE@' '/home/opam/.opam/5.3-opam/lib/findlib.conf' | \ - ../../tools/patch '@STDLIB@' '/home/opam/.opam/5.3-opam/lib/ocaml' | \ - ../../tools/patch '@RELATIVE_PATHS@' 'false' | \ - sed -e 's;@AUTOLINK@;true;g' \ - -e 's;@SYSTEM@;linux;g' \ - >findlib_config.ml - if [ "true" = "true" ]; then \ - cp topfind.ml.in topfind.ml; \ - else \ - sed -e '/PPXOPT_BEGIN/,/PPXOPT_END/ d' topfind.ml.in \ - > topfind.ml ; \ - fi - ocamldep *.ml *.mli >depend - ocamlc -I +compiler-libs -opaque -I +unix -I +dynlink -g -c fl_compat.ml - ocamlc -I +compiler-libs -opaque -I +unix -I +dynlink -g -c fl_split.ml - ocamlc -I +compiler-libs -opaque -I +unix -I +dynlink -g -c findlib_config.ml - ocamlc -I +compiler-libs -opaque -I +unix -I +dynlink -g -c fl_metatoken.ml - ocamlc -I +compiler-libs -opaque -I +unix -I +dynlink -g -c fl_meta.ml - ocamlc -I +compiler-libs -opaque -I +unix -I +dynlink -c fl_metascanner.mli - ocamlc -I +compiler-libs -opaque -I +unix -I +dynlink -g -c fl_metascanner.ml - ocamlc -I +compiler-libs -opaque -I +unix -I +dynlink -c fl_topo.mli - ocamlc -I +compiler-libs -opaque -I +unix -I +dynlink -g -c fl_topo.ml - ocamlc -I +compiler-libs -opaque -I +unix -I +dynlink -c fl_package_base.mli - ocamlc -I +compiler-libs -opaque -I +unix -I +dynlink -g -c fl_package_base.ml - ocamlc -I +compiler-libs -opaque -I +unix -I +dynlink -c findlib.mli - ocamlc -I +compiler-libs -opaque -I +unix -I +dynlink -g -c findlib.ml - ocamlc -I +compiler-libs -opaque -I +unix -I +dynlink -g -c fl_args.ml - ocamlc -I +compiler-libs -opaque -I +unix -I +dynlink -g -c fl_lint.ml - ocamlc -I +compiler-libs -a -o findlib.cma fl_compat.cmo fl_split.cmo findlib_config.cmo fl_metatoken.cmo fl_meta.cmo fl_metascanner.cmo fl_topo.cmo fl_package_base.cmo findlib.cmo fl_args.cmo fl_lint.cmo - ocamlc -I +compiler-libs -opaque -I +unix -I +dynlink -g -c ocaml_args.ml - ocamlc -I +compiler-libs -opaque -I +unix -I +dynlink -g -c frontend.ml - ocamlc -I +compiler-libs -o ocamlfind -g findlib.cma unix.cma \ - -I +unix -I +dynlink ocaml_args.cmo frontend.cmo - ocamlc -I +compiler-libs -opaque -I +unix -I +dynlink -c topfind.mli - ocamlc -I +compiler-libs -opaque -I +unix -I +dynlink -g -c topfind.ml - File "topfind.ml", line 128, characters 40-63: - 128 | match Hashtbl.find Toploop.directive_table "ppx" with - ^^^^^^^^^^^^^^^^^^^^^^^ - Alert deprecated: Toploop.directive_table - - File "topfind.ml", line 258, characters 4-27: - 258 | Toploop.directive_table - ^^^^^^^^^^^^^^^^^^^^^^^ - Alert deprecated: Toploop.directive_table - - File "topfind.ml", line 268, characters 4-27: - 268 | Toploop.directive_table - ^^^^^^^^^^^^^^^^^^^^^^^ - Alert deprecated: Toploop.directive_table - - File "topfind.ml", line 280, characters 4-27: - 280 | Toploop.directive_table - ^^^^^^^^^^^^^^^^^^^^^^^ - Alert deprecated: Toploop.directive_table - - File "topfind.ml", line 293, characters 4-27: - 293 | Toploop.directive_table - ^^^^^^^^^^^^^^^^^^^^^^^ - Alert deprecated: Toploop.directive_table - - File "topfind.ml", line 307, characters 4-27: - 307 | Toploop.directive_table - ^^^^^^^^^^^^^^^^^^^^^^^ - Alert deprecated: Toploop.directive_table - - File "topfind.ml", line 319, characters 4-27: - 319 | Toploop.directive_table - ^^^^^^^^^^^^^^^^^^^^^^^ - Alert deprecated: Toploop.directive_table - ocamlc -I +compiler-libs -a -o findlib_top.cma topfind.cmo - if [ "1" = "1" ]; then \ - cp topfind.in topfind.compat.in; \ - else \ - sed -e '/REMOVE_DIRECTORY_BEGIN/,/REMOVE_DIRECTORY_END/ d' topfind.in \ - > topfind.compat.in ; \ - fi - USE_CYGPATH="0"; \ - export USE_CYGPATH; \ - cat topfind.compat.in | \ - ../../tools/patch '@SITELIB@' '/home/opam/.opam/5.3-opam/lib' | \ - ../../tools/patch '@RELATIVE_PATHS@' 'false' \ - >topfind - ocamlc -I +compiler-libs -opaque -I +unix -I +dynlink -c fl_dynload.mli - ocamlc -I +compiler-libs -opaque -I +unix -I +dynlink -g -c fl_dynload.ml - ocamlc -I +compiler-libs -a -o findlib_dynload.cma fl_dynload.cmo - make[1]: Leaving directory '/home/opam/.opam/5.3-opam/.opam-switch/build/ocamlfind.1.9.8/src/findlib' - make all-config - make[1]: Entering directory '/home/opam/.opam/5.3-opam/.opam-switch/build/ocamlfind.1.9.8' - if [ "false" = "true" ]; then \ - make findlib-relative; \ - else \ - make findlib-absolute; \ - fi - make[2]: Entering directory '/home/opam/.opam/5.3-opam/.opam-switch/build/ocamlfind.1.9.8' - USE_CYGPATH="0"; \ - export USE_CYGPATH; \ - cat findlib.conf.in | \ - tools/patch '@SITELIB@' '/home/opam/.opam/5.3-opam/lib' | \ - tools/patch '@FINDLIB_PATH@' '/home/opam/.opam/5.3-opam/lib/ocaml:/home/opam/.opam/5.3-opam/lib' -p >findlib.conf - if ./tools/cmd_from_same_dir ocamlc; then \ - echo 'ocamlc="ocamlc.opt"' >>findlib.conf; \ - fi - if ./tools/cmd_from_same_dir ocamlopt; then \ - echo 'ocamlopt="ocamlopt.opt"' >>findlib.conf; \ - fi - if ./tools/cmd_from_same_dir ocamldep; then \ - echo 'ocamldep="ocamldep.opt"' >>findlib.conf; \ - fi - if ./tools/cmd_from_same_dir ocamldoc; then \ - echo 'ocamldoc="ocamldoc.opt"' >>findlib.conf; \ - fi - make[2]: Leaving directory '/home/opam/.opam/5.3-opam/.opam-switch/build/ocamlfind.1.9.8' - make[1]: Leaving directory '/home/opam/.opam/5.3-opam/.opam-switch/build/ocamlfind.1.9.8' Processing 78/103: [cpu: dune build] [dune-configurator: dune build] [ocamlfind: make opt] [ounit2: dune build] [ppxlib: dune build] + /home/opam/.opam/opam-init/hooks/sandbox.sh "build" "dune" "build" "-p" "ounit2" "-j" "39" "@install" (CWD=/home/opam/.opam/5.3-opam/.opam-switch/build/ounit2.2.2.7) -> compiled ounit2.2.2.7 Processing 78/103: [cpu: dune build] [dune-configurator: dune build] [ocamlfind: make opt] [ppxlib: dune build] -> installed ounit2.2.2.7 Processing 79/103: [cpu: dune build] [dune-configurator: dune build] [ocamlfind: make opt] [ppxlib: dune build] Processing 80/103: [cpu: dune build] [dune-configurator: dune build] [ocamlfind: make opt] [ppxlib: dune build] [qcheck-ounit: dune build] + /home/opam/.opam/opam-init/hooks/sandbox.sh "build" "dune" "build" "-p" "cpu" "-j" "39" (CWD=/home/opam/.opam/5.3-opam/.opam-switch/build/cpu.2.0.0) -> compiled cpu.2.0.0 Processing 80/103: [dune-configurator: dune build] [ocamlfind: make opt] [ppxlib: dune build] [qcheck-ounit: dune build] -> installed cpu.2.0.0 Processing 81/103: [dune-configurator: dune build] [ocamlfind: make opt] [ppxlib: dune build] [qcheck-ounit: dune build] Processing 82/103: [dune-configurator: dune build] [ocamlfind: make opt] [parany: dune build] [ppxlib: dune build] [qcheck-ounit: dune build] + /home/opam/.opam/opam-init/hooks/sandbox.sh "build" "dune" "build" "-p" "qcheck-ounit" "-j" "39" (CWD=/home/opam/.opam/5.3-opam/.opam-switch/build/qcheck-ounit.0.25) -> compiled qcheck-ounit.0.25 Processing 82/103: [dune-configurator: dune build] [ocamlfind: make opt] [parany: dune build] [ppxlib: dune build] -> installed qcheck-ounit.0.25 Processing 83/103: [dune-configurator: dune build] [ocamlfind: make opt] [parany: dune build] [ppxlib: dune build] Processing 84/103: [dune-configurator: dune build] [ocamlfind: make opt] [parany: dune build] [ppxlib: dune build] [qcheck: dune build] + /home/opam/.opam/opam-init/hooks/sandbox.sh "build" "dune" "build" "-p" "parany" "-j" "39" (CWD=/home/opam/.opam/5.3-opam/.opam-switch/build/parany.14.0.1) -> compiled parany.14.0.1 Processing 84/103: [dune-configurator: dune build] [ocamlfind: make opt] [ppxlib: dune build] [qcheck: dune build] -> installed parany.14.0.1 Processing 85/103: [dune-configurator: dune build] [ocamlfind: make opt] [ppxlib: dune build] [qcheck: dune build] + /home/opam/.opam/opam-init/hooks/sandbox.sh "build" "dune" "build" "-p" "dune-configurator" "-j" "39" "@install" (CWD=/home/opam/.opam/5.3-opam/.opam-switch/build/dune-configurator.3.18.1) -> compiled dune-configurator.3.18.1 Processing 85/103: [ocamlfind: make opt] [ppxlib: dune build] [qcheck: dune build] -> installed dune-configurator.3.18.1 Processing 86/103: [ocamlfind: make opt] [ppxlib: dune build] [qcheck: dune build] + /home/opam/.opam/opam-init/hooks/sandbox.sh "build" "dune" "build" "-p" "qcheck" "-j" "39" (CWD=/home/opam/.opam/5.3-opam/.opam-switch/build/qcheck.0.25) -> compiled qcheck.0.25 Processing 86/103: [ocamlfind: make opt] [ppxlib: dune build] -> installed qcheck.0.25 Processing 87/103: [ocamlfind: make opt] [ppxlib: dune build] + /home/opam/.opam/opam-init/hooks/sandbox.sh "build" "make" "opt" (CWD=/home/opam/.opam/5.3-opam/.opam-switch/build/ocamlfind.1.9.8) - for p in findlib; do ( cd src/$p; make opt ) || exit; done - make[1]: Entering directory '/home/opam/.opam/5.3-opam/.opam-switch/build/ocamlfind.1.9.8/src/findlib' - ocamlopt -I +compiler-libs -g -opaque -I +unix -I +dynlink -c fl_compat.ml - ocamlopt -I +compiler-libs -g -opaque -I +unix -I +dynlink -c fl_split.ml - ocamlopt -I +compiler-libs -g -opaque -I +unix -I +dynlink -c findlib_config.ml - ocamlopt -I +compiler-libs -g -opaque -I +unix -I +dynlink -c fl_metatoken.ml - ocamlopt -I +compiler-libs -g -opaque -I +unix -I +dynlink -c fl_meta.ml - ocamlopt -I +compiler-libs -g -opaque -I +unix -I +dynlink -c fl_metascanner.ml - ocamlopt -I +compiler-libs -g -opaque -I +unix -I +dynlink -c fl_topo.ml - ocamlopt -I +compiler-libs -g -opaque -I +unix -I +dynlink -c fl_package_base.ml - ocamlopt -I +compiler-libs -g -opaque -I +unix -I +dynlink -c findlib.ml - ocamlopt -I +compiler-libs -g -opaque -I +unix -I +dynlink -c fl_args.ml - ocamlopt -I +compiler-libs -g -opaque -I +unix -I +dynlink -c fl_lint.ml - ocamlopt -I +compiler-libs -g -a -o findlib.cmxa fl_compat.cmx fl_split.cmx findlib_config.cmx fl_metatoken.cmx fl_meta.cmx fl_metascanner.cmx fl_topo.cmx fl_package_base.cmx findlib.cmx fl_args.cmx fl_lint.cmx - if [ 1 -gt 0 ]; then \ - ocamlopt -I +compiler-libs -g -shared -o findlib.cmxs fl_compat.cmx fl_split.cmx findlib_config.cmx fl_metatoken.cmx fl_meta.cmx fl_metascanner.cmx fl_topo.cmx fl_package_base.cmx findlib.cmx fl_args.cmx fl_lint.cmx; \ - fi - ocamlopt -I +compiler-libs -g -opaque -I +unix -I +dynlink -c ocaml_args.ml - ocamlopt -I +compiler-libs -g -opaque -I +unix -I +dynlink -c frontend.ml - ocamlopt -I +compiler-libs -g -o ocamlfind_opt findlib.cmxa unix.cmxa \ - -I +unix -I +dynlink ocaml_args.cmx frontend.cmx - ocamlopt -I +compiler-libs -g -opaque -I +unix -I +dynlink -c topfind.ml - File "topfind.ml", line 128, characters 40-63: - 128 | match Hashtbl.find Toploop.directive_table "ppx" with - ^^^^^^^^^^^^^^^^^^^^^^^ - Alert deprecated: Toploop.directive_table - - File "topfind.ml", line 258, characters 4-27: - 258 | Toploop.directive_table - ^^^^^^^^^^^^^^^^^^^^^^^ - Alert deprecated: Toploop.directive_table - - File "topfind.ml", line 268, characters 4-27: - 268 | Toploop.directive_table - ^^^^^^^^^^^^^^^^^^^^^^^ - Alert deprecated: Toploop.directive_table - - File "topfind.ml", line 280, characters 4-27: - 280 | Toploop.directive_table - ^^^^^^^^^^^^^^^^^^^^^^^ - Alert deprecated: Toploop.directive_table - - File "topfind.ml", line 293, characters 4-27: - 293 | Toploop.directive_table - ^^^^^^^^^^^^^^^^^^^^^^^ - Alert deprecated: Toploop.directive_table - - File "topfind.ml", line 307, characters 4-27: - 307 | Toploop.directive_table - ^^^^^^^^^^^^^^^^^^^^^^^ - Alert deprecated: Toploop.directive_table - - File "topfind.ml", line 319, characters 4-27: - 319 | Toploop.directive_table - ^^^^^^^^^^^^^^^^^^^^^^^ - Alert deprecated: Toploop.directive_table - ocamlopt -I +compiler-libs -g -a -o findlib_top.cmxa topfind.cmx - if [ 1 -gt 0 ]; then \ - ocamlopt -I +compiler-libs -g -shared -o findlib_top.cmxs topfind.cmx; \ - fi - ocamlopt -I +compiler-libs -g -opaque -I +unix -I +dynlink -c fl_dynload.ml - ocamlopt -I +compiler-libs -g -a -o findlib_dynload.cmxa fl_dynload.cmx - if [ 1 -gt 0 ]; then \ - ocamlopt -I +compiler-libs -g -shared -o findlib_dynload.cmxs fl_dynload.cmx; \ - fi - make[1]: Leaving directory '/home/opam/.opam/5.3-opam/.opam-switch/build/ocamlfind.1.9.8/src/findlib' -> compiled ocamlfind.1.9.8 Processing 87/103: [ppxlib: dune build] Processing 88/103: [ppxlib: dune build] [ocamlfind: make install] + /home/opam/.opam/opam-init/hooks/sandbox.sh "install" "make" "install" (CWD=/home/opam/.opam/5.3-opam/.opam-switch/build/ocamlfind.1.9.8) - if [ "0" -eq 1 ]; then \ - for x in camlp4 dbm graphics labltk num ocamlbuild; do \ - if [ -f "/home/opam/.opam/5.3-opam/lib/$x/META" ]; then \ - if ! grep -Fq '[distributed with Ocaml]' "//home/opam/.opam/5.3-opam/lib/$x/META"; then \ - rm -f site-lib-src/$x/META; \ - fi; \ - fi; \ - done; \ - test -f "site-lib-src/num/META" || rm -f "site-lib-src/num-top/META"; \ - fi - echo 'SITELIB_META =' > Makefile.packages.in - for x in `ls site-lib-src`; do test ! -f "site-lib-src/$x/META" || echo $x >> Makefile.packages.in; done - tr '\n' ' ' < Makefile.packages.in > Makefile.packages - rm Makefile.packages.in - install -d "/home/opam/.opam/5.3-opam/bin" - install -d "/home/opam/.opam/5.3-opam/man" - make install-config - make[1]: Entering directory '/home/opam/.opam/5.3-opam/.opam-switch/build/ocamlfind.1.9.8' - install -d "`dirname \"/home/opam/.opam/5.3-opam/lib/findlib.conf\"`" - test -f "/home/opam/.opam/5.3-opam/lib/findlib.conf" || cp findlib.conf "/home/opam/.opam/5.3-opam/lib/findlib.conf" - make[1]: Leaving directory '/home/opam/.opam/5.3-opam/.opam-switch/build/ocamlfind.1.9.8' - for p in findlib; do ( cd src/$p; make install ); done - make[1]: Entering directory '/home/opam/.opam/5.3-opam/.opam-switch/build/ocamlfind.1.9.8/src/findlib' - install -d "/home/opam/.opam/5.3-opam/lib/findlib" - install -d "/home/opam/.opam/5.3-opam/bin" - test 1 -eq 0 || install -d "/home/opam/.opam/5.3-opam/lib/ocaml" - test 1 -eq 0 || cp topfind "/home/opam/.opam/5.3-opam/lib/ocaml/" - files=` ../../tools/collect_files ../../Makefile.config \ - findlib.cmi findlib.mli findlib.cma findlib.cmxa findlib.a findlib.cmxs \ - findlib_config.cmi findlib_config.ml topfind.cmi topfind.mli \ - fl_args.cmi fl_lint.cmi fl_meta.cmi fl_split.cmi fl_topo.cmi ocaml_args.cmi \ - fl_package_base.mli fl_package_base.cmi fl_metascanner.mli fl_metascanner.cmi \ - fl_metatoken.cmi findlib_top.cma findlib_top.cmxa findlib_top.a findlib_top.cmxs \ - findlib_dynload.cma findlib_dynload.cmxa findlib_dynload.a findlib_dynload.cmxs fl_dynload.mli fl_dynload.cmi \ - META` && \ - cp $files "/home/opam/.opam/5.3-opam/lib/findlib/" - f="ocamlfind"; { test -f ocamlfind_opt && f="ocamlfind_opt"; }; \ - install -c $f "/home/opam/.opam/5.3-opam/bin/ocamlfind" - # the following "if" block is only needed for 4.00beta2 - if [ 1 -eq 0 -a -f "/home/opam/.opam/5.3-opam/lib/ocaml/compiler-libs/topdirs.cmi" ]; then \ - cd "/home/opam/.opam/5.3-opam/lib/ocaml/compiler-libs/"; \ - cp topdirs.cmi toploop.cmi "/home/opam/.opam/5.3-opam/lib/findlib/"; \ - fi - make[1]: Leaving directory '/home/opam/.opam/5.3-opam/.opam-switch/build/ocamlfind.1.9.8/src/findlib' - make install-meta - make[1]: Entering directory '/home/opam/.opam/5.3-opam/.opam-switch/build/ocamlfind.1.9.8' - for x in bytes ; do install -d "/home/opam/.opam/5.3-opam/lib/$x"; cp site-lib-src/$x/META "/home/opam/.opam/5.3-opam/lib/$x/META.tmp" && mv "/home/opam/.opam/5.3-opam/lib/$x/META.tmp" "/home/opam/.opam/5.3-opam/lib/$x/META"; done - install -d "/home/opam/.opam/5.3-opam/lib/findlib"; cp Makefile.packages "/home/opam/.opam/5.3-opam/lib/findlib/Makefile.packages" - make[1]: Leaving directory '/home/opam/.opam/5.3-opam/.opam-switch/build/ocamlfind.1.9.8' - test ! -f 'site-lib-src/num-top/META' || { cd src/findlib; make install-num-top; } - test ! -f 'site-lib-src/camlp4/META' || install -c tools/safe_camlp4 "/home/opam/.opam/5.3-opam/bin" - make install-doc - make[1]: Entering directory '/home/opam/.opam/5.3-opam/.opam-switch/build/ocamlfind.1.9.8' - install -d "/home/opam/.opam/5.3-opam/man/man1" "/home/opam/.opam/5.3-opam/man/man3" "/home/opam/.opam/5.3-opam/man/man5" - cp doc/ref-man/ocamlfind.1 "/home/opam/.opam/5.3-opam/man/man1" - cp: cannot stat 'doc/ref-man/ocamlfind.1': No such file or directory - make[1]: [Makefile:91: install-doc] Error 1 (ignored) - cp doc/ref-man/META.5 doc/ref-man/site-lib.5 doc/ref-man/findlib.conf.5 "/home/opam/.opam/5.3-opam/man/man5" - cp: cannot stat 'doc/ref-man/META.5': No such file or directory - cp: cannot stat 'doc/ref-man/site-lib.5': No such file or directory - cp: cannot stat 'doc/ref-man/findlib.conf.5': No such file or directory - make[1]: [Makefile:92: install-doc] Error 1 (ignored) - make[1]: Leaving directory '/home/opam/.opam/5.3-opam/.opam-switch/build/ocamlfind.1.9.8' -> installed ocamlfind.1.9.8 Processing 88/103: [ppxlib: dune build] Processing 89/103: [ppxlib: dune build] Processing 90/103: [batteries: dune build] [ppxlib: dune build] Processing 91/103: [batteries: dune build] [camlzip: make all] [ppxlib: dune build] -> installed base-bytes.base Processing 92/103: [batteries: dune build] [camlzip: make all] [ppxlib: dune build] + /home/opam/.opam/opam-init/hooks/sandbox.sh "build" "make" "all" (CWD=/home/opam/.opam/5.3-opam/.opam-switch/build/camlzip.1.13) - ocamlfind ocamlc -g -safe-string -bin-annot -package unix -c -ccopt -g zlibstubs.c - ocamlfind ocamlmklib -oc camlzip zlibstubs.o -lz - ocamlfind ocamlc -g -safe-string -bin-annot -package unix -c zlib.mli - ocamlfind ocamlc -g -safe-string -bin-annot -package unix -c zlib.ml - ocamlfind ocamlc -g -safe-string -bin-annot -package unix -c zip.mli - ocamlfind ocamlc -g -safe-string -bin-annot -package unix -c zip.ml - ocamlfind ocamlc -g -safe-string -bin-annot -package unix -c gzip.mli - ocamlfind ocamlc -g -safe-string -bin-annot -package unix -c gzip.ml - ocamlfind ocamlmklib -o zip -oc camlzip zlib.cmo zip.cmo gzip.cmo -lz - ocamlfind ocamlopt -safe-string -package unix -c zlib.ml - ocamlfind ocamlopt -safe-string -package unix -c zip.ml - ocamlfind ocamlopt -safe-string -package unix -c gzip.ml - ocamlfind ocamlmklib -o zip -oc camlzip zlib.cmx zip.cmx gzip.cmx -lz - ocamlfind ocamlopt -safe-string -package unix -shared -linkall -I ./ -o zip.cmxs zip.cmxa libcamlzip.a -> compiled camlzip.1.13 Processing 92/103: [batteries: dune build] [ppxlib: dune build] Processing 93/103: [batteries: dune build] [ppxlib: dune build] [camlzip: make install] + /home/opam/.opam/opam-init/hooks/sandbox.sh "install" "make" "install" (CWD=/home/opam/.opam/5.3-opam/.opam-switch/build/camlzip.1.13) - cp META-zip META && \ - ocamlfind install zip META *.cma *.a *.mli *.cmi *.cmti *.cmt gzip.cmx zip.cmx zlib.cmx zip.cmxa zip.cmxs dllcamlzip.so && \ - rm META - Installed /home/opam/.opam/5.3-opam/lib/zip/zip.cmxs - Installed /home/opam/.opam/5.3-opam/lib/zip/zip.cmxa - Installed /home/opam/.opam/5.3-opam/lib/zip/zlib.cmx - Installed /home/opam/.opam/5.3-opam/lib/zip/zip.cmx - Installed /home/opam/.opam/5.3-opam/lib/zip/gzip.cmx - Installed /home/opam/.opam/5.3-opam/lib/zip/zlib.cmt - Installed /home/opam/.opam/5.3-opam/lib/zip/zip.cmt - Installed /home/opam/.opam/5.3-opam/lib/zip/gzip.cmt - Installed /home/opam/.opam/5.3-opam/lib/zip/zlib.cmti - Installed /home/opam/.opam/5.3-opam/lib/zip/zip.cmti - Installed /home/opam/.opam/5.3-opam/lib/zip/gzip.cmti - Installed /home/opam/.opam/5.3-opam/lib/zip/zlib.cmi - Installed /home/opam/.opam/5.3-opam/lib/zip/zip.cmi - Installed /home/opam/.opam/5.3-opam/lib/zip/gzip.cmi - Installed /home/opam/.opam/5.3-opam/lib/zip/zlib.mli - Installed /home/opam/.opam/5.3-opam/lib/zip/zip.mli - Installed /home/opam/.opam/5.3-opam/lib/zip/gzip.mli - Installed /home/opam/.opam/5.3-opam/lib/zip/zip.a - Installed /home/opam/.opam/5.3-opam/lib/zip/libcamlzip.a - Installed /home/opam/.opam/5.3-opam/lib/zip/zip.cma - Installed /home/opam/.opam/5.3-opam/lib/stublibs/dllcamlzip.so - Installed /home/opam/.opam/5.3-opam/lib/stublibs/dllcamlzip.so.owner - ocamlfind: [WARNING] You have installed DLLs but the directory /home/opam/.opam/5.3-opam/lib/stublibs is not mentioned in ld.conf - Installed /home/opam/.opam/5.3-opam/lib/zip/META - cp META-camlzip META && \ - ocamlfind install camlzip META && \ - rm META - Installed /home/opam/.opam/5.3-opam/lib/camlzip/META -> installed camlzip.1.13 Processing 93/103: [batteries: dune build] [ppxlib: dune build] + /home/opam/.opam/opam-init/hooks/sandbox.sh "build" "dune" "build" "-p" "batteries" "-j" "39" "@install" (CWD=/home/opam/.opam/5.3-opam/.opam-switch/build/batteries.3.9.0) -> compiled batteries.3.9.0 Processing 93/103: [ppxlib: dune build] -> installed batteries.3.9.0 Processing 94/103: [ppxlib: dune build] Processing 95/103: [cpm: dune build] [ppxlib: dune build] + /home/opam/.opam/opam-init/hooks/sandbox.sh "build" "dune" "build" "-p" "cpm" "-j" "39" (CWD=/home/opam/.opam/5.3-opam/.opam-switch/build/cpm.12.2.0) -> compiled cpm.12.2.0 Processing 95/103: [ppxlib: dune build] -> installed cpm.12.2.0 Processing 96/103: [ppxlib: dune build] + /home/opam/.opam/opam-init/hooks/sandbox.sh "build" "dune" "build" "-p" "ppxlib" "-j" "39" "@install" (CWD=/home/opam/.opam/5.3-opam/.opam-switch/build/ppxlib.0.36.0) -> compiled ppxlib.0.36.0 -> installed ppxlib.0.36.0 Processing 98/103: [extunix: dune build] + /home/opam/.opam/opam-init/hooks/sandbox.sh "build" "dune" "build" "-p" "extunix" "-j" "39" "@install" (CWD=/home/opam/.opam/5.3-opam/.opam-switch/build/extunix.0.4.4) - (cd _build/default/src && ../discover/discover.exe) - checking EVENTFD.............ok - checking ATFILE..............ok - checking RENAMEAT2...........ok - checking RENAME_WHITEOUT.....ok - checking DIRFD...............ok - checking STATVFS.............ok - checking FSTATVFS............ok - checking SIOCGIFCONF.........ok - checking IFADDRS.............ok - checking INET_NTOA...........ok - checking INET_NTOP...........ok - checking UNAME...............ok - checking FADVISE.............ok - checking FALLOCATE...........ok - checking TTY_IOCTL...........ok - checking TTYNAME.............ok - checking CTERMID.............ok - checking GETTID..............ok - checking PGID................ok - checking SETREUID............ok - checking FSYNC...............ok - checking FDATASYNC...........ok - checking SYNC................ok - checking SYNCFS..............ok - checking REALPATH............ok - checking SIGNALFD............ok - checking PTRACE..............ok - checking RESOURCE............ok - checking MLOCKALL............ok - checking STRPTIME............ok - checking STRTIME.............ok - checking TIMEZONE............ok - checking TIMEGM..............ok - checking PTS.................ok - checking FCNTL...............ok - checking TCPGRP..............ok - checking EXECINFO............ok - checking SETENV..............ok - checking CLEARENV............ok - checking MKDTEMP.............ok - checking MALLOC_INFO.........ok - checking MALLOC_STATS........ok - checking MEMALIGN............ok - checking ENDIAN..............ok - checking READ_CREDENTIALS....ok - checking FEXECVE.............ok - checking SENDMSG.............ok - checking PREAD...............ok - checking PWRITE..............ok - checking READ................ok - checking WRITE...............ok - checking MKSTEMPS............ok - checking MKOSTEMPS...........ok - checking SETRESUID...........ok - checking SYSCONF.............ok - checking SPLICE..............ok - checking TEE.................ok - checking VMSPLICE............ok - checking SOCKOPT.............ok - checking TCP_KEEPIDLE........ok - checking TCP_KEEPCNT.........ok - checking TCP_KEEPINTVL.......ok - checking SO_REUSEPORT........ok - checking POLL................ok - checking SYSINFO.............ok - checking MCHECK..............ok - checking MOUNT...............ok - checking UNSHARE.............ok - checking CHROOT..............ok - checking SYSLOG..............ok - checking WAIT4...............ok -> compiled extunix.0.4.4 -> installed extunix.0.4.4 Processing 100/103: [dokeysto: dune build] + /home/opam/.opam/opam-init/hooks/sandbox.sh "build" "dune" "build" "-p" "dokeysto" "-j" "39" (CWD=/home/opam/.opam/5.3-opam/.opam-switch/build/dokeysto.4.0.1) -> compiled dokeysto.4.0.1 -> installed dokeysto.4.0.1 [lbvs_consent: patch] applying makefile.patch Processing 102/103: [lbvs_consent: patch] Processing 102/103: [lbvs_consent: make obmaccs] + /home/opam/.opam/opam-init/hooks/sandbox.sh "build" "make" "obmaccs" (CWD=/home/opam/.opam/5.3-opam/.opam-switch/build/lbvs_consent.2.2.0) - cd src; make - make[1]: Entering directory '/home/opam/.opam/5.3-opam/.opam-switch/build/lbvs_consent.2.2.0/src' - c++ -W -Wall `pkg-config --silence-errors --cflags openbabel-2.0 || pkg-config --cflags openbabel-3` ob_maccs.cpp \ - -o lbvs_consent_ob_maccs `pkg-config --silence-errors --libs openbabel-2.0 || pkg-config --libs openbabel-3` -Wl,-R/usr/lib - In file included from /usr/include/openbabel3/openbabel/fingerprint.h:28, - from ob_maccs.cpp:1: - /usr/include/openbabel3/openbabel/plugin.h:41:42: warning: 'template<class _Arg1, class _Arg2, class _Result> struct std::binary_function' is deprecated [-Wdeprecated-declarations] - 41 | struct OBERROR CharPtrLess : public std::binary_function<const char*,const char*, bool> - | ^~~~~~~~~~~~~~~ - In file included from /usr/include/c++/14/bits/stl_tree.h:65, - from /usr/include/c++/14/map:62, - from /usr/include/openbabel3/openbabel/fingerprint.h:23: - /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here - 131 | struct binary_function - | ^~~~~~~~~~~~~~~ - In file included from /usr/include/openbabel3/openbabel/mol.h:48, - from ob_maccs.cpp:2: - /usr/include/openbabel3/openbabel/base.h: In member function 'virtual const char* OpenBabel::OBBase::GetTitle(bool) const': - /usr/include/openbabel3/openbabel/base.h:286:49: warning: unused parameter 'replaceNewlines' [-Wunused-parameter] - 286 | virtual const char *GetTitle(bool UNUSED(replaceNewlines) = true) const { return "";} - | ^ - /usr/include/openbabel3/openbabel/base.h:37:20: note: in definition of macro 'UNUSED' - 37 | # define UNUSED(x) x - | ^ - make[1]: Leaving directory '/home/opam/.opam/5.3-opam/.opam-switch/build/lbvs_consent.2.2.0/src' Processing 102/103: [lbvs_consent: dune build] + /home/opam/.opam/opam-init/hooks/sandbox.sh "build" "dune" "build" "-p" "lbvs_consent" "-j" "39" (CWD=/home/opam/.opam/5.3-opam/.opam-switch/build/lbvs_consent.2.2.0) -> compiled lbvs_consent.2.2.0 Processing 103/103: [lbvs_consent: cp] + /home/opam/.opam/opam-init/hooks/sandbox.sh "install" "cp" "bin/lbvs_consent_ecfp4.py" "/home/opam/.opam/5.3-opam/bin/lbvs_consent_ecfp4.py" (CWD=/home/opam/.opam/5.3-opam/.opam-switch/build/lbvs_consent.2.2.0) + /home/opam/.opam/opam-init/hooks/sandbox.sh "install" "cp" "src/lbvs_consent_ob_maccs" "/home/opam/.opam/5.3-opam/bin/lbvs_consent_ob_maccs" (CWD=/home/opam/.opam/5.3-opam/.opam-switch/build/lbvs_consent.2.2.0) -> installed lbvs_consent.2.2.0 Done. # To update the current shell environment, run: eval $(opam env) 2025-04-21 13:11.52 ---> saved as "24c66154dd424f536da52e77b3451ee5e505e25f70f23595233edc5fe09a597c" Job succeeded